arXiv:2609.09928v1 Announce Type: new Abstract: Latent reasoning approaches enhance token-level efficiency and robustness by replacing verbose, explicit chain-of-thought (CoT) tokens with compact continuous-space embeddings. However, existing methods lack direct process supervision over these latent embeddings, which often leads to representation collapse and uneven information distribution. To address this, we propose Prototype-Mediated Process Supervision (PMPS), which introduces learnable reasoning prototypes as semantic anchors to provide structural process-level supervision for latent reasoning. PMPS projects latent embeddings and explicit CoT embeddings into a shared prototype space, achieving many-to-many soft alignment between unequal-length representations through prototype assignment. Meanwhile, we introduce a Progressive Sequential Alignment (PSA) module to further guide training: positional priors initially encourage sequential alignment structure, then gradually relax to permit adaptive matching. Experimental results show that PMPS compresses output token length to under 50% of explicit CoT on GSM8K-Aug. Compared to leading baseline SIM-CoT, our method achieves average accuracy gains of 2.08% across different model families. On GPT-2, PMPS even surpasses CoT-SFT. On larger models and a more challenging task, PMPS consistently attains the highest accuracy among all latent reasoning methods with comparable output length.

arXiv:2609.10263v1 Announce Type: new Abstract: Persistent language agents need stored experience to remain available across time, while each answer requires evidence suited to a particular question. A superseded fact can mislead a current-state answer and still be essential for a historical query. We present RD-Forget, a training-free framework that separates what an agent stores from what it uses. A retained source archive preserves observations, and a query-conditioned memory view controls their influence on the current answer. A frozen language-model curator extracts relevant evidence, groups facts into semantic slots, and preserves the relations needed for multi-hop reasoning. Same-slot replacement links suppress superseded values in current-state contexts, while intent-aware retrieval makes earlier evidence eligible again. A rate-distortion formulation guides construction of the answer-time view within a memory budget. Experiments span conversational memory, knowledge updating, fact consolidation, long-context reasoning, and personalization under a shared answering pipeline. The results associate accurate answers with both query-relevant evidence construction and control over obsolete alternatives. Configurations without forgetting or query conditioning have the largest score deficits, while slot grouping, historical access, and relation preservation contribute complementary functions. Retaining history while selectively controlling its use offers a practical way to accommodate changing facts and future questions.

arXiv:2609.09626v1 Announce Type: cross Abstract: Open-world object detection (OWOD) extends closed-set detection by requiring models to identify unknown objects and incrementally learn them once annotations become available. In remote sensing imagery, object categories often exhibit latent hierarchical relationships that may be inadequately represented in the Euclidean spaces commonly adopted by existing methods, limiting unknown-object recall and incremental-learning performance. To address this issue, we investigate hyperbolic geometry for OWOD in remote sensing imagery and propose HyRS-OWOD. To improve unknown object recall, we design a two-step unknown-object discovery mechanism: a Decoupled Objectness Learning (DOL) module that disentangles foreground perception from semantic information to separate foreground proposals from background regions, followed by a Hyperbolic Uncertainty Learning (HUL) component that leverages the radius of hyperbolic embeddings as an uncertainty-aware cue for known-unknown discrimination. For incremental learning, we develop a Hyperbolic Metric Learning (HML) strategy that enhances inter-class separability, facilitating the incorporation of novel categories while mitigating catastrophic forgetting. Experiments on three remote sensing benchmarks demonstrate consistent improvements in unknown recall and incremental learning over state-of-the-art OWOD methods.

arXiv:2609.09798v1 Announce Type: cross Abstract: Large language models (LLMs) have been ex- ploited to generate malware, but the effective- ness of guardrails for code generation secu- rity remains unclear. We introduce CS-Guard, the first benchmark to systematically evalu- ate guardrails for code generation security. It covers 1) text-to-code generation with 1000 high-quality malware-generation prompts, 7 jailbreak attacks, and a novel fictional scenario attack (FSA) that embeds malicious intent in a legitimate fictional software-development sce- nario; and 2) code-to-code generation with 331 code prompts spanning code infilling, code completion, and code translation. We empiri- cally evaluate 9 guardrails across seven LLMs. We find that current guardrails perform poorly against malicious code-generation re- quests: for text-to-code, the average attack success rate (ASR) after jailbreaks reaches about 50% for many guardrails; for code-to- code, average ASR approaches 100% on base LLMs and remains high across many guardrails (14.4% to nearly 100%). Our FSA also achieves ASR close to 100% across many guardrails, raising major reliability concerns for real-world software development. To sup- port future research, CS-Guard uses a modular three-layer guardrail taxonomy that lets devel- opers register guardrails for evaluation. We release the benchmark and data to enable fur- ther community evaluation.

arXiv:2609.09883v1 Announce Type: cross Abstract: Depth pruning reduces large language model (LLM) inference cost by removing complete Transformer blocks. Activation-based methods collect hidden states through forward passes on calibration data, while existing forward-free methods score each Transformer block separately without measuring similarity between blocks. We propose Weight-Redundancy Pruning (WRP), a forward-free depth-pruning method that estimates inter-layer redundancy from checkpoint weights to select blocks without calibration data or model forward passes. WRP compares attention output and MLP down-projection weights across layers and combines their pairwise similarities with relative projection-scale information. The resulting all-pairs similarity matrix guides layer grouping and block selection. Across multiple pruning settings, model families, and downstream tasks, WRP consistently outperforms existing forward-free magnitude pruning and approaches the performance of activation-based methods.

arXiv:2609.10108v1 Announce Type: cross Abstract: Aging clocks quantify biological aging and help characterize individual health status. What protein interactions are important for accurate aging clocks, and are they zeroth-order or higher-order? Addressing these questions requires learning from large molecular datasets distributed across medical centers, where privacy constraints prevent centralized data sharing. Federated learning offers a natural solution but faces four challenges in this setting: limited local sample sizes, sparse and directional inter-center trust, the need to retain discriminative age prediction while supporting interpretation, and model drift and forgetting under heterogeneous cross-center data. We propose TNFL, a trust-network-based federated learning framework that progressively propagates models along directed pairwise trust relations without centralized aggregation. TNFL combines an age-aware mixture-of-experts model with generative replay to preserve previously learned information and reduce forgetting and drift. Experiments across multiple molecular datasets show that TNFL enables effective aging-clock prediction with limited local data, provides interpretable age-dependent prediction patterns, and maintains stable performance across interaction orders. To investigate the biological questions, we analyze TNFL-identified pairwise protein interactions and their higher-order organization through functional and network analyses. The identified interactions repeatedly form coordinated higher-order subnetworks spanning multiple aging-related biological systems, with several proteins recurring across subnetworks. These findings suggest that TNFL captures molecular relationships beyond isolated pairwise associations and reveals coherent higher-order biological organization associated with aging.

arXiv:2609.10142v1 Announce Type: cross Abstract: Large language models remain fragile against malicious fine-tuning, motivating training-time defenses against harmful persona drift. Preventative Steering injects undesirable-trait persona vectors during fine-tuning and removes them at evaluation time, yet the mechanism behind its lasting protection remains unclear. Analyzing its temporal optimization dynamics, we find that the defense emerges from an early compensatory adaptation phase followed by a steady-state phase where the corrective signal decays; in parameter space, attention output projections emerge as the dominant residual-write route for defensive updates. Through Intervention Delta Preservation (IDP) and IDP Continuation experiments, we further show that preserving or reinjecting the weight offset fails to maintain protection, indicating that preventative steering relies on active adaptation rather than a static defense. Motivated by this finding, we propose Progressive Intensity Scheduling (PIS), which starts with a moderate injection strength and increases it after static-strength alignment begins to decay. Across the evaluated Qwen2.5 and Gemma-3 models, PIS improves safety robustness over static-strength steering while reducing harmful trait expression.

arXiv:2609.10305v1 Announce Type: cross Abstract: Language models under one million parameters matter for edge deployment, domain adaptation, and reproducible research, yet a two-layer LSTM or Transformer at embedding width d = 128 still spends roughly one third of its capacity on the output matrix W_out in R^(d x |V|). We propose Riemannian Language Models (RiLM), which remove that layer entirely: context unfolds as a trajectory on a Riemannian manifold, and next-token probabilities arise from squared geodesic distance between the current state and vocabulary embeddings. The same embedding map serves input and output -- decoding is geometry. We instantiate the framework on flat R^d (Flat RiLM) and the Poincare ball H^d (HypRiLM) with a shared MLP composition map phi (~290k parameters, d = 128, |V| = 2000). Across five seeds on WikiText-2, HypRiLM reaches 54.2 +/- 0.2 validation perplexity versus 87.6 +/- 0.6 for Flat RiLM; tied and matched LSTM, Transformer, and SSM controls remain at 113-147 PPL on WT-2 -- HypRiLM leads by roughly 2x over the strongest tied recurrent baseline (SSM, 113.0 +/- 3.8). Penn Treebank and a 10k-vocabulary stress test confirm that geodesic decoding transfers across corpora and larger |V|, while hyperbolic curvature helps selectively. We also characterize boundary collapse in naive hyperbolic recurrence and show how Mobius stabilization restores trainability. Claims are scoped to controlled small-model comparisons, not full-vocabulary state of the art.

arXiv:2609.10522v1 Announce Type: cross Abstract: Foundation vision-language models (VLMs) exhibit broad intelligence about the world, yet translating this intelligence into robot control remains challenging. We present Show-Harness, an Embodied Harness that enables VLMs to "play" robots through a compact semantic interface linking intent to action. Show-Harness exposes discrete semantic action units that VLMs can naturally reason over, while embodiment-specific interpreters deterministically ground them into local robot actions, keeping the VLM directly responsible for fine-grained physical decisions. Through the same interface, Show-Harness demonstrates the feasibility of (1) directly unlocking closed-source frontier VLMs for zero-shot robot control, and (2) adapting small-scale open-source VLMs for low-cost deployment with just a few GPU-hours of fine-tuning. We further develop GUMI (GUI Manipulation Interface), which extends the same semantic action space to GUI-based demonstration collection, allowing humans and agents to "play" robots across embodiments without specialized teleoperation hardware. Extensive experiments show that Show-Harness-equipped VLM agents generalize robustly across tasks, embodiments, and environments, outperforming representative agentic and VLA paradigms. These results suggest that the right interface can unlock substantial embodied capability from foundation VLMs, without requiring additional model capacity or costly embodiment-specific pretraining.

arXiv:2607.12455v2 Announce Type: replace Abstract: Quantitative strategy optimization remains largely manual, requiring domain experts to identify weak signals, tune risk-control rules, and repeatedly validate iterative revisions. Large language models can accelerate this process, but directly relying on them to rewrite trading strategies often introduces hallucinated edits, strategy drift, and backtest overfitting. We propose EVOQUANT, a self-Evolving Verifier-guided framework for strategy Optimization in Quantitative trading. Our method utilizes LLMs to deeply diagnose performance bottlenecks, generates semantically controlled candidate edits, selects the best strategy through a multi-stage verification pipeline, and distills optimization experience into reusable knowledge for continual self-improvement. We evaluate our method using seven representative strategies: four from the A-share market and three from the Crypto market. Experimental results show that our method significantly improves the Sharpe ratio across all tested strategies: the average test Sharpe increases from -0.298 to 0.538, and the best-performing strategy achieves a 199% relative improvement. Ablation studies and stress tests under stricter conditions further validate the effectiveness and robustness of the framework. Overall, this work transforms quantitative strategy optimization from costly manual trial and error into an automated and verifiable iterative paradigm, offering a new path for applying large language models to financial strategy research.

arXiv:2607.27231v3 Announce Type: replace Abstract: Modern AI systems depend on specialized accelerator kernels, whose development is complicated by increasingly diverse operators and hardware. LLMs and agentic systems promise to automate this work, but existing evaluations do not show whether their performance transfers across operator sources and hardware platforms, or what such transfer costs. We present KernelGenBench, the first unified multi-source and multi-chip infrastructure for evaluating LLM- and agent-generated Triton kernels. With a common Triton target spanning six hardware platforms, it provides the broadest cross-vendor hardware coverage among existing kernel-generation benchmarks. We report two controlled analytical views: KernelGenBench-MS (Multi-Source) covers 210 operators from PyTorch ATen, production vLLM operators, and proprietary cuBLAS routines, while KernelGenBench-MC (Multi-Chip) evaluates a semantically stable 110-operator subset across six hardware platforms. Our evaluation consumed over 15 billion tokens. Agentic execution improved correctness, but no method dominated across sources and platforms: vLLM posed the strongest correctness challenge, cuBLAS set the highest performance ceiling, and AutoKernel accuracy fell from 87% on NVIDIA to 25% on Iluvatar CoreX. These improvements were costly: specialized agents averaged 4.99 million tokens per successful operator, rising to 6.25 million for CUDA Optimized Skill. The results establish operator source, hardware platform, and agentic scaffold as distinct dimensions of kernel-generation capability, and show that success in a familiar source-hardware setting is not a reliable proxy for deployment readiness.

arXiv:2608.06411v2 Announce Type: replace Abstract: Multimodal large language models (MLLMs) achieve strong performance across diverse vision-language tasks, but their efficiency is limited by the cost of processing numerous visual tokens. Visual token pruning can reduce this cost, but requires accurate token importance estimates. Recent studies have demonstrated that text-to-vision attention from middle language model layers can effectively guide visual token pruning, typically using attention from a predefined middle layer to select the visual tokens to retain. Two problems therefore remain. First, our analysis shows that the layer whose attention is most responsive to the question varies substantially across samples, making a fixed layer suboptimal. Second, obtaining attention from the appropriate middle layer requires processing numerous visual tokens through several language model layers, by which point considerable computation has already been spent. To address both problems, we propose Middle-layer Attention Prediction (MAP), which uses Question Contrastive Teacher Selection to identify a sample-specific teacher layer by contrasting attention under the original and reference questions, and distills attention from the selected layer into a lightweight predictor that estimates visual token importance from multi-modal input features. During inference, MAP combines the predicted importance scores with a diversity criterion to prune visual tokens before the first language model layer. Thus, MAP requires no attention maps for pruning and remains compatible with existing inference acceleration techniques. Across ten benchmarks on LLaVA-NeXT-7B, MAP retains 97.5% of the unpruned model performance with only 5.56% of the visual tokens, yielding a 3.09x end-to-end speedup.

arXiv:2608.24979v2 Announce Type: replace Abstract: Scientific agents increasingly analyze data, execute code, and produce research artifacts, yet most benchmarks emphasize final answers, isolated programs, or a single domain. We introduce FrontierChallenge, a cross-domain benchmark comprising 300 end-to-end scientific workflows. In this paper, we release and evaluate 97 of these tasks, spanning quantum chemistry, molecular dynamics, materials characterization, analytical chemistry, life science, and electrochemistry/environment. Each task provides fixed inputs and specifies a bundle of required scientific deliverables. We evaluate twelve frontier models with three agent scaffolds. Pass Rate measures the fraction of tasks satisfying the full-completion criterion, while Avg. Score captures partial progress. Each of the best-performing configurations completed only 20 of the 97 released tasks, yielding a Pass Rate of 20.6%. Partial progress translated especially poorly into complete delivery in analytical chemistry and electrochemistry/environment: Avg. Scores reached 87.6 and 94.9, but the highest Pass Rates were only 4% and 0%. Among non-passing Claude Code trajectories, 75.5% still ended with language claiming completion. Complementary HDS6 process scores correlate strongly with task outcomes, supporting FrontierChallenge as a benchmark of Heavy Duty Solver capabilities. These findings show that neither high partial scores nor confident claims of completion reliably indicate that a scientific task has been fully delivered, highlighting the need to evaluate end-to-end workflow execution and the completeness of scientific deliverables together.

arXiv:2609.04298v2 Announce Type: replace Abstract: Evaluating agents on the growing number of agentic benchmarks is challenging because they often require complex environments and agent integrations. We introduce Harbor Adapters, a unified evaluation infrastructure for agentic benchmarks. Our work makes three contributions. First, we develop benchmark adapters that port more than 80 benchmarks to evaluate arbitrary agents, and validate them through rigorous code review and parity experiments. Second, we conduct a large-scale evaluation of 8 models spanning capability tiers across 54 benchmarks; every model is run with Terminus-2 and with one of 3 native harnesses. This enables a broader analysis of agent capabilities and failure modes than was previously possible. Third, we introduce Harbor-Index, a curated set of 82 difficult, diverse, and high-quality tasks spanning 29 benchmarks, refined from the adapted suite through difficulty filtering, AI and human audit, and an audit-and-fix loop. Harbor-Index preserves the challenge and breadth of large-scale agentic evaluations while being affordable to run; no evaluated model-harness configuration exceeds 30% pass rate, and the strongest (GPT-5.5 with Codex) reaches 28.0%. We release the adapters, evaluation results, in-depth analysis, and Harbor-Index as open-source artifacts to support more reliable and comprehensive evaluation of language-model agents.

arXiv:2508.08005v5 Announce Type: replace-cross Abstract: Although the Maximum Clique Problem (MCP) has been extensively studied and features a rich ecosystem of exact solvers, empirical evidence shows that solver performance varies substantially across graph families. Consequently, selecting an appropriate algorithm for a given instance remains an open and practically important challenge that has received little systematic attention. We address this gap by developing an instance-aware selection framework that systematically combines global statistical descriptors with learned topological representations. We construct a comprehensive benchmark by evaluating four state-of-the-art exact solvers on a diverse collection of graph instances and deriving both global statistical and local structural features. An evaluation of conventional classifiers establishes Random Forest as a strong baseline and reveals that connectivity and topological features are key predictors of performance. Motivated by these observations, we introduce a dual-channel architecture that jointly leverages a Graph Attention Network for capturing local neighborhood patterns and a Multilayer Perceptron for modeling global statistical features. Extensive experiments show that the proposed dual-channel model consistently surpasses classical baselines and the single-best solver, achieving 90.43% test accuracy. These findings demonstrate the value of integrating local topological encoding with global statistical cues for combinatorial algorithm selection. Code and models are available at: https://anonymous.4open.science/r/GAT-MLP-7E5F.

arXiv:2509.22404v2 Announce Type: replace-cross Abstract: Anatomical understanding, which is the ability to identify, localize, or segment anatomical structures, is critical in medical image analysis; however, its progress is constrained by the scarcity of expert-labeled data. A promising remedy is to leverage an annotated reference image to guide the interpretation of an unlabeled target. Although recent vision-language models (VLMs) exhibit non-trivial visual reasoning, their reference-based understanding and fine-grained localization remain limited. We introduce RAU, a framework for reference-based anatomical understanding with VLMs. We first show that a VLM learns to identify anatomical regions through relative spatial reasoning between reference and target images, trained on a moderately sized dataset. We validate this capability through visual question answering (VQA) and bounding box prediction. Next, we demonstrate that the VLM-derived spatial cues can be seamlessly integrated with the fine-grained segmentation capability of SAM2, enabling localization and pixel-level segmentation of small anatomical regions, such as vessel segments. Across two in-distribution and two out-of-distribution datasets, RAU consistently outperforms a SAM2 fine-tuning baseline using the same memory setup, yielding more accurate segmentations and more reliable localization. More importantly, its generalization ability to unseen modalities makes it scalable to unseen datasets, a property crucial for medical image applications. To the best of our knowledge, RAU is the first to explore the capability of VLMs for reference-based identification, localization, and segmentation of anatomical structures in medical images. Its promising performance highlights the potential of VLM-driven approaches for anatomical understanding in automated clinical workflows.

arXiv:2608.30935v2 Announce Type: replace-cross Abstract: Embodied navigation requires agents to translate heterogeneous goals and visual observations into actions across tasks, environments, and robot embodiments. Modern vision-language models (VLMs) already encode spatial priors for visual grounding, spatial reasoning, and pointing, but these capabilities are rarely elicited directly for robot control. Existing navigation systems instead rely on task- or embodiment-specific components, fragmenting perception, reasoning, and action while offering limited generalization. Here we present LightNav-0, a compact generalist embodied navigation model that elicits the spatial intelligence of a pretrained VLM and aligns it with navigation, without task-specific prediction heads. LightNav-0 represents diverse navigation tasks through a unified token interface: dual-channel pointing expresses task-, scene-, and embodiment-agnostic spatial intent, while a residual vector-quantized action tokenizer maps this intent to precise, embodiment-specific trajectories. Together with temporally aware visual history compression, ER mid-training, supervised fine-tuning, and reinforcement learning, this formulation supports instruction following, open-vocabulary object navigation, and visual tracking within a single model. The navigation training corpus spans 2K+ scenes and 4K+ hours of embodied navigation data. LightNav-ER, the embodied-reasoning checkpoint used to initialize LightNav-0, attains the highest complete-set average across 8 embodied-reasoning benchmarks, while LightNav-0 achieves state-of-the-art monocular success rates across all 10 public navigation simulation settings. Real-world evaluations further demonstrate zero-shot generalization across robot embodiments, diverse scenes, and static and dynamic targets. These results establish compact VLMs as a unified and transferable backbone for generalist embodied navigation.

arXiv:2605.23931v1 Announce Type: new Abstract: The formal verification of operating system kernels requires precise specifications that capture the intended behavior of system calls. Writing these specifications manually demands deep domain expertise, motivating the use of large language models (LLMs) to automate the process. However, in OSV-Bench, a benchmark of 245 specification generation tasks derived from the Hyperkernel OS kernel, the best reported Pass@1 is 55.10%. We propose a domain knowledge prompting method (BODHI), which augments the standard few-shot prompt with a structured C-to-Python translation guide covering 15 categories of domain-specific translation patterns. Inspired by Structured Chain-of-Thought (SCoT) prompting, the guide organizes translation by separation of concerns, addressing pre-condition extraction and post-condition generation as distinct categories. Evaluated on nine models from six providers (Anthropic, Mistral, Amazon, DeepSeek, Meta, Alibaba), covering dense, mixture-of-experts and reasoning architectures, BODHI improves every model tested, with gains ranging from +11% to +32%. The best configuration (Claude Opus 4.6 + BODHI) reaches 96.73% Pass@1. BODHI reduces both syntax and semantic errors, with the strongest effect on models that have sufficient instruction-following capability to utilize structured reference material. These results demonstrate that domain knowledge injection is a model-agnostic technique that substantially bridges the gap between general-purpose code generation and formal specification synthesis.

arXiv:2605.23955v1 Announce Type: new Abstract: Deploying machine learning in regulated financial environments -- credit risk, fraud detection, and anti-money laundering -- exposes critical vulnerabilities in algorithmic reproducibility. While early financial ML addressed statistical challenges such as backtest overfitting, deep neural networks and Generative AI have introduced mechanical nondeterminism rooted in hardware and architecture. This survey provides a systems perspective on reproducibility failures across three modalities now dominant in financial AI: tabular models (post-hoc explanation variance), graph networks (stochastic sampling and temporal asynchrony), and LLM-based agentic workflows (batch-dependent divergence and trajectory drift). We supplement the literature analysis with first-party experiments on public financial datasets -- quantifying explanation rank instability in credit scoring, prediction flip rates in GNN-based fraud detection, and tensor-parallel-induced output divergence in LLM entity extraction. We propose a layered evaluation framework linking modality-specific metrics (RBO, D_cos, TDI, PSD) to audit readiness, and empirically validate the complementarity of logit-level and semantic-level determinism measures.

arXiv:2605.24497v1 Announce Type: new Abstract: Large Reasoning Models (LRMs) have demonstrated remarkable capabilities in reasoning and generation tasks and are increasingly deployed in real-world applications. However, their explicit chain-of-thought (CoT) mechanism introduces new security risks, making them particularly vulnerable to jailbreak attacks. Existing approaches often rely on static CoT templates to elicit harmful outputs, but such fixed designs suffer from limited diversity, adaptability, and effectiveness. To overcome these limitations, we propose an adaptive evolutionary CoT jailbreak framework, called AE-CoT. Specifically, the method first rewrites harmful goals into mild prompts with teacher role-play and decomposes them into semantically coherent reasoning fragments to construct a pool of CoT jailbreak candidates. Then, within a structured representation space, we perform multi-generation evolutionary search, where candidate diversity is expanded through fragment-level crossover and a mutation strategy with an adaptive mutation-rate control mechanism. An independent scoring model provides graded harmfulness evaluations, and high-scoring candidates are further enhanced with a harmful CoT template to induce more destructive generations. Extensive experiments across multiple models and datasets demonstrate the effectiveness of the proposed AE-CoT, consistently outperforming state-of-the-art jailbreak methods.