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cs.AI, q-bio.NC updates on arXiv.org
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Digital Twin based Automatic Reconfiguration of Robotic Systems in Smart Environments
arXiv:2511.00094v1 Announce Type: cross Abstract: Robotic systems have become integral to smart environments, enabling applications ranging from urban surveillance and automated agriculture to industrial automation. However, their effective operation in dynamic settings - such as smart cities and precision farming - is challenged by continuously evolving topographies and environmental conditions. Traditional control systems often struggle to adapt quickly, leading to inefficiencies or operation
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cs.AI, q-bio.NC updates on arXiv.org
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Will Humanity Be Rendered Obsolete by AI?
arXiv:2510.22814v2 Announce Type: replace Abstract: This article analyzes the existential risks artificial intelligence (AI) poses to humanity, tracing the trajectory from current AI to ultraintelligence. Drawing on Irving J. Good and Nick Bostrom's theoretical work, plus recent publications (AI 2027; If Anyone Builds It, Everyone Dies), it explores AGI and superintelligence. Considering machines' exponentially growing cognitive power and hypothetical IQs, it addresses the ethical and existenti
Will Humanity Be Rendered Obsolete by AI?
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cs.AI, q-bio.NC updates on arXiv.org
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The Denario project: Deep knowledge AI agents for scientific discovery
arXiv:2510.26887v1 Announce Type: new Abstract: We present Denario, an AI multi-agent system designed to serve as a scientific research assistant. Denario can perform many different tasks, such as generating ideas, checking the literature, developing research plans, writing and executing code, making plots, and drafting and reviewing a scientific paper. The system has a modular architecture, allowing it to handle specific tasks, such as generating an idea, or carrying out end-to-end scientific
The Denario project: Deep knowledge AI agents for scientific discovery
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cs.AI, q-bio.NC updates on arXiv.org
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Frame Semantic Patterns for Identifying Underreporting of Notifiable Events in Healthcare: The Case of Gender-Based Violence
arXiv:2510.26969v1 Announce Type: cross Abstract: We introduce a methodology for the identification of notifiable events in the domain of healthcare. The methodology harnesses semantic frames to define fine-grained patterns and search them in unstructured data, namely, open-text fields in e-medical records. We apply the methodology to the problem of underreporting of gender-based violence (GBV) in e-medical records produced during patients' visits to primary care units. A total of eight pattern
Frame Semantic Patterns for Identifying Underreporting of Notifiable Events in Healthcare: The Case of Gender-Based Violence
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cs.AI, q-bio.NC updates on arXiv.org
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A Systematic Literature Review of Spatio-Temporal Graph Neural Network Models for Time Series Forecasting and Classification
arXiv:2410.22377v3 Announce Type: replace-cross Abstract: In recent years, spatio-temporal graph neural networks (GNNs) have attracted considerable interest in the field of time series analysis, due to their ability to capture, at once, dependencies among variables and across time points. The objective of this systematic literature review is hence to provide a comprehensive overview of the various modeling approaches and application domains of GNNs for time series classification and forecasting
A Systematic Literature Review of Spatio-Temporal Graph Neural Network Models for Time Series Forecasting and Classification
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cs.AI, q-bio.NC updates on arXiv.org
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Deep Learning-based Prediction of Clinical Trial Enrollment with Uncertainty Estimates
arXiv:2507.23607v2 Announce Type: replace-cross Abstract: Clinical trials are a systematic endeavor to assess the safety and efficacy of new drugs or treatments. Conducting such trials typically demands significant financial investment and meticulous planning, highlighting the need for accurate predictions of trial outcomes. Accurately predicting patient enrollment, a key factor in trial success, is one of the primary challenges during the planning phase. In this work, we propose a novel deep l
Deep Learning-based Prediction of Clinical Trial Enrollment with Uncertainty Estimates
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cs.AI, q-bio.NC updates on arXiv.org
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A Process Mining-Based System For The Analysis and Prediction of Software Development Workflows
arXiv:2510.25935v2 Announce Type: replace-cross Abstract: CodeSight is an end-to-end system designed to anticipate deadline compliance in software development workflows. It captures development and deployment data directly from GitHub, transforming it into process mining logs for detailed analysis. From these logs, the system generates metrics and dashboards that provide actionable insights into PR activity patterns and workflow efficiency. Building on this structured representation, CodeSight
A Process Mining-Based System For The Analysis and Prediction of Software Development Workflows
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cs.AI, q-bio.NC updates on arXiv.org
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On the limitation of evaluating machine unlearning using only a single training seed
arXiv:2510.26714v2 Announce Type: replace-cross Abstract: Machine unlearning (MU) aims to remove the influence of certain data points from a trained model without costly retraining. Most practical MU algorithms are only approximate and their performance can only be assessed empirically. Care must therefore be taken to make empirical comparisons as representative as possible. A common practice is to run the MU algorithm multiple times independently starting from the same trained model. In this w
On the limitation of evaluating machine unlearning using only a single training seed
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MRD
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International expert consensus on the clinical integration of circulating tumor cells in solid tumors
Eur J Cancer. 2025 Dec 9;231:116050. doi: 10.1016/j.ejca.2025.116050. Epub 2025 Oct 20.ABSTRACTBACKGROUND: Circulating tumor cells (CTCs) are a versatile biomarker in solid tumors. Extensive research supports their clinical relevance and led to regulatory approval in breast, prostate, and colorectal cancers. However, clinical adoption remains limited mainly due to the lack of consensus and standardized technologies. Additionally, CTC research lacks unified direction. To address these gaps, an in
International expert consensus on the clinical integration of circulating tumor cells in solid tumors
Eur J Cancer. 2025 Dec 9;231:116050. doi: 10.1016/j.ejca.2025.116050. Epub 2025 Oct 20.
ABSTRACT
BACKGROUND: Circulating tumor cells (CTCs) are a versatile biomarker in solid tumors. Extensive research supports their clinical relevance and led to regulatory approval in breast, prostate, and colorectal cancers. However, clinical adoption remains limited mainly due to the lack of consensus and standardized technologies. Additionally, CTC research lacks unified direction. To address these gaps, an international expert panel was established to assess the current and future clinical utility of CTCs.
METHODS: A panel of 11 CTC experts identified key areas of controversy, informing a structured survey distributed to 55 international multidisciplinary experts. Consensus was predefined as ≥ 70 % agreement. Areas without consensus were discussed in a virtual meeting, leading to final statements on the clinical integration of CTCs.
RESULTS: Thirty-seven experts completed the survey. Consensus was reached on the clinical utility of CTCs for prognosis and treatment monitoring in metastatic breast (BC) and prostate (PC) cancers, including AR-V7 testing in metastatic castration-resistant PC for therapy selection. In other tumors, CTCs remain investigational. Experts agreed that while clinical utility is not yet established in early-stage disease, CTCs show promise in early BC, especially combined with cell-free DNA (cfDNA) for minimal residual disease detection. CellSearch® is currently the only platform with high-level evidence for clinical use, though emerging technologies are promising. Key challenges include improving detection sensitivity/specificity, standardizing workflows, generating robust data, and clinician education. Experts emphasized shifting from enumeration to phenotypic and molecular characterization, particularly for treatment guidance, and highlighted the complementary role of CTCs and cfDNA, advocating for integrated liquid biopsy approaches.
CONCLUSIONS: This consensus offers practical guidance for clinical integration of CTCs and outlines strategic research priorities to unlock their full potential in precision oncology.
PMID:41172567 | DOI:10.1016/j.ejca.2025.116050
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(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
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Animal models in tuberculosis metabolomics: a systematic review of current evidence and the road to translational relevance
Front Mol Biosci. 2025 Oct 15;12:1688882. doi: 10.3389/fmolb.2025.1688882. eCollection 2025.ABSTRACTBACKGROUND: Animal models are important for tuberculosis (TB) research, offering controlled settings to study disease mechanisms. However, their ability to replicate TB-induced metabolic responses in humans is uncertain. This systematic review evaluated the current use of animal models in metabolomics studies aimed at characterising active pulmonary TB.METHODS: PubMed, Scopus, and Web of Science w
Animal models in tuberculosis metabolomics: a systematic review of current evidence and the road to translational relevance
Front Mol Biosci. 2025 Oct 15;12:1688882. doi: 10.3389/fmolb.2025.1688882. eCollection 2025.
ABSTRACT
BACKGROUND: Animal models are important for tuberculosis (TB) research, offering controlled settings to study disease mechanisms. However, their ability to replicate TB-induced metabolic responses in humans is uncertain. This systematic review evaluated the current use of animal models in metabolomics studies aimed at characterising active pulmonary TB.
METHODS: PubMed, Scopus, and Web of Science were systematically searched for metabolomics studies of pulmonary TB in humans and animal models, following PRISMA guidelines. Eligible studies were screened, and quality was assessed using QUDOMICS and STAIR tools. Data were synthesised by species, sample matrix, experimental design, and reported differential metabolites. Differential metabolite names were compared between species and subjected to pathway analysis in MetaboAnalyst 6.0.
RESULTS: Of the 80 eligible studies, nine involved animal models, predominantly mice. These models captured only 4.7% of human TB-associated differential metabolites, with the highest overlap (3.8%) in mouse lung tissue. Despite low concordance at metabolite level, conserved disruptions were observed in amino acid, glutathione, and one-carbon metabolism pathways. Interspecies variation was evident, influenced by host species, sample matrix, infection protocol, and analytical method.
CONCLUSION: Animal models partially replicated key metabolic features of human TB, particularly at the pathway level. However, variability across studies hampers current translational interpretation. Broader model use, standardised protocols, and integrated multi-platform omics approaches are needed to improve the relevance and comparability of animal models in TB metabolomics research.
PMID:41169614 | PMC:PMC12568366 | DOI:10.3389/fmolb.2025.1688882
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Journal of Medical Internet Research
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Digital Health Technology Compliance With Clinical Safety Standards In the National Health Service in England: National Cross-Sectional Study
Background: To be authorized for use in the National Health Service (NHS) in England, digital health technologies (DHTs) must meet 2 mandatory clinical risk management standards, Data Coordination Board (DCB) 0129 and 0160, demonstrating that risks from design and use have been assessed and mitigated. NHS organizations must not procure a DHT without DCB0129 assurance and must not deploy one without DCB0160 assurance. Despite legal requirement, no public data exist on how many DHTs are in use in
Digital Health Technology Compliance With Clinical Safety Standards In the National Health Service in England: National Cross-Sectional Study
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Journal of Medical Internet Research
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Opportunities and Challenges for Designing in Connected Health: Insights From an Expert Workshop
Health care increasingly depends on information and communication technology. This offers both opportunities and challenges when designing connected health systems. While individual studies examined particular cases, there is a limited synthesis of insights across projects. The objective of this paper is to explore these opportunities and challenges by examining 6 diverse connected health projects and synthesizing lessons from an expert workshop. To achieve this, we conducted a full-day workshop
Opportunities and Challenges for Designing in Connected Health: Insights From an Expert Workshop
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cs.AI, q-bio.NC updates on arXiv.org
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An Agentic Framework for Rapid Deployment of Edge AI Solutions in Industry 5.0
arXiv:2510.25813v1 Announce Type: new Abstract: We present a novel framework for Industry 5.0 that simplifies the deployment of AI models on edge devices in various industrial settings. The design reduces latency and avoids external data transfer by enabling local inference and real-time processing. Our implementation is agent-based, which means that individual agents, whether human, algorithmic, or collaborative, are responsible for well-defined tasks, enabling flexibility and simplifying inte
An Agentic Framework for Rapid Deployment of Edge AI Solutions in Industry 5.0
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cs.AI, q-bio.NC updates on arXiv.org
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SciTrust 2.0: A Comprehensive Framework for Evaluating Trustworthiness of Large Language Models in Scientific Applications
arXiv:2510.25908v1 Announce Type: new Abstract: Large language models (LLMs) have demonstrated transformative potential in scientific research, yet their deployment in high-stakes contexts raises significant trustworthiness concerns. Here, we introduce SciTrust 2.0, a comprehensive framework for evaluating LLM trustworthiness in scientific applications across four dimensions: truthfulness, adversarial robustness, scientific safety, and scientific ethics. Our framework incorporates novel, open-e
SciTrust 2.0: A Comprehensive Framework for Evaluating Trustworthiness of Large Language Models in Scientific Applications
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cs.AI, q-bio.NC updates on arXiv.org
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Human-AI Complementarity: A Goal for Amplified Oversight
arXiv:2510.26518v1 Announce Type: new Abstract: Human feedback is critical for aligning AI systems to human values. As AI capabilities improve and AI is used to tackle more challenging tasks, verifying quality and safety becomes increasingly challenging. This paper explores how we can leverage AI to improve the quality of human oversight. We focus on an important safety problem that is already challenging for humans: fact-verification of AI outputs. We find that combining AI ratings and human r
Human-AI Complementarity: A Goal for Amplified Oversight
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cs.AI, q-bio.NC updates on arXiv.org
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Agentic AI Home Energy Management System: A Large Language Model Framework for Residential Load Scheduling
arXiv:2510.26603v1 Announce Type: new Abstract: The electricity sector transition requires substantial increases in residential demand response capacity, yet Home Energy Management Systems (HEMS) adoption remains limited by user interaction barriers requiring translation of everyday preferences into technical parameters. While large language models have been applied to energy systems as code generators and parameter extractors, no existing implementation deploys LLMs as autonomous coordinators
Agentic AI Home Energy Management System: A Large Language Model Framework for Residential Load Scheduling
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cs.AI, q-bio.NC updates on arXiv.org
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Identity Management for Agentic AI: The new frontier of authorization, authentication, and security for an AI agent world
arXiv:2510.25819v1 Announce Type: cross Abstract: The rapid rise of AI agents presents urgent challenges in authentication, authorization, and identity management. Current agent-centric protocols (like MCP) highlight the demand for clarified best practices in authentication and authorization. Looking ahead, ambitions for highly autonomous agents raise complex long-term questions regarding scalable access control, agent-centric identities, AI workload differentiation, and delegated authority. Th
Identity Management for Agentic AI: The new frontier of authorization, authentication, and security for an AI agent world
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cs.AI, q-bio.NC updates on arXiv.org
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Multi-Agent Reinforcement Learning for Market Making: Competition without Collusion
arXiv:2510.25929v1 Announce Type: cross Abstract: Algorithmic collusion has emerged as a central question in AI: Will the interaction between different AI agents deployed in markets lead to collusion? More generally, understanding how emergent behavior, be it a cartel or market dominance from more advanced bots, affects the market overall is an important research question. We propose a hierarchical multi-agent reinforcement learning framework to study algorithmic collusion in market making. T
Multi-Agent Reinforcement Learning for Market Making: Competition without Collusion
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cs.AI, q-bio.NC updates on arXiv.org
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The Quest for Reliable Metrics of Responsible AI
arXiv:2510.26007v1 Announce Type: cross Abstract: The development of Artificial Intelligence (AI), including AI in Science (AIS), should be done following the principles of responsible AI. Progress in responsible AI is often quantified through evaluation metrics, yet there has been less work on assessing the robustness and reliability of the metrics themselves. We reflect on prior work that examines the robustness of fairness metrics for recommender systems as a type of AI application and summa
The Quest for Reliable Metrics of Responsible AI
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cs.AI, q-bio.NC updates on arXiv.org
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Integrating Genomics into Multimodal EHR Foundation Models
arXiv:2510.23639v2 Announce Type: replace-cross Abstract: This paper introduces an innovative Electronic Health Record (EHR) foundation model that integrates Polygenic Risk Scores (PRS) as a foundational data modality, moving beyond traditional EHR-only approaches to build more holistic health profiles. Leveraging the extensive and diverse data from the All of Us (AoU) Research Program, this multimodal framework aims to learn complex relationships between clinical data and genetic predispositio