Normal view
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cs.AI, q-bio.NC updates on arXiv.org
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Japanese AI Agent System on Human Papillomavirus Vaccination: System Design
arXiv:2601.10718v1 Announce Type: new Abstract: Human papillomavirus (HPV) vaccine hesitancy poses significant public health challenges, particularly in Japan where proactive vaccination recommendations were suspended from 2013 to 2021. The resulting information gap is exacerbated by misinformation on social media, and traditional ways cannot simultaneously address individual queries while monitoring population-level discourse. This study aimed to develop a dual-purpose AI agent system that pro
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cs.AI, q-bio.NC updates on arXiv.org
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AnyECG: Evolved ECG Foundation Model for Holistic Health Profiling
arXiv:2601.10748v1 Announce Type: cross Abstract: Background: Artificial intelligence enabled electrocardiography (AI-ECG) has demonstrated the ability to detect diverse pathologies, but most existing models focus on single disease identification, neglecting comorbidities and future risk prediction. Although ECGFounder expanded cardiac disease coverage, a holistic health profiling model remains needed. Methods: We constructed a large multicenter dataset comprising 13.3 million ECGs from 2.98
AnyECG: Evolved ECG Foundation Model for Holistic Health Profiling
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cs.AI, q-bio.NC updates on arXiv.org
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MetaboNet: The Largest Publicly Available Consolidated Dataset for Type 1 Diabetes Management
arXiv:2601.11505v1 Announce Type: cross Abstract: Progress in Type 1 Diabetes (T1D) algorithm development is limited by the fragmentation and lack of standardization across existing T1D management datasets. Current datasets differ substantially in structure and are time-consuming to access and process, which impedes data integration and reduces the comparability and generalizability of algorithmic developments. This work aims to establish a unified and accessible data resource for T1D algorithm
MetaboNet: The Largest Publicly Available Consolidated Dataset for Type 1 Diabetes Management
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npj Digital Medicine
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Wearable device derived electrocardiographic age and its association with atrial fibrillation
npj Digital Medicine, Published online: 17 January 2026; doi:10.1038/s41746-026-02344-8Wearable device derived electrocardiographic age and its association with atrial fibrillation
Wearable device derived electrocardiographic age and its association with atrial fibrillation
npj Digital Medicine, Published online: 17 January 2026; doi:10.1038/s41746-026-02344-8
Wearable device derived electrocardiographic age and its association with atrial fibrillation-
TechCrunch
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From OpenAIβs offices to a deal with Eli Lilly β how Chai Discovery became one of the flashiest names in AI drug development
The startup has partnered with Eli Lilly and enjoys the backing of some of Silicon Valley's most influential VCs.
From OpenAIβs offices to a deal with Eli Lilly β how Chai Discovery became one of the flashiest names in AI drug development
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TechCrunch
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The AI healthcare gold rush is here
AI companies are clustering around healthcare and fast.Β In just the past week, OpenAIΒ bought health startup Torch, Anthropic launchedΒ Claude for healthcare, and Sam Altman-backedΒ MergeLabs closed a $250 million seed roundΒ at an $850 million valuation. The money and products are pouring into healthΒ and voice AI, but so are concerns about hallucination risks, inaccurate medical information, and [β¦]
The AI healthcare gold rush is here
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(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
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Cellular neighborhoods in cancer
Nat Cancer. 2026 Jan 16. doi: 10.1038/s43018-025-01107-w. Online ahead of print.ABSTRACTThe concept of cellular neighborhoods, defined as recurring structures within the tissue with characteristic cell compositions and interactions, has transformed our understanding of the complexity and dynamics of tumor ecosystems. Recent advances in spatial omics and computational modeling have enabled high-resolution mapping of these neighborhoods, providing unprecedented insights into their roles in shaping
Cellular neighborhoods in cancer
Nat Cancer. 2026 Jan 16. doi: 10.1038/s43018-025-01107-w. Online ahead of print.
ABSTRACT
The concept of cellular neighborhoods, defined as recurring structures within the tissue with characteristic cell compositions and interactions, has transformed our understanding of the complexity and dynamics of tumor ecosystems. Recent advances in spatial omics and computational modeling have enabled high-resolution mapping of these neighborhoods, providing unprecedented insights into their roles in shaping tumor heterogeneity, evolution and therapeutic responses. Despite these advances, a unified framework for interpreting cellular neighborhoods remains lacking. This Perspective synthesizes emerging concepts and insights, focusing on the definition and classification of cellular neighborhoods in cancer, computational methods for identifying and comparing them, and their clinical relevance.
PMID:41545713 | DOI:10.1038/s43018-025-01107-w
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Nature Cancer
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Glucagon-like peptide-1 medicines and cancer
Nature Cancer, Published online: 16 January 2026; doi:10.1038/s43018-025-01110-1Yabut and Drucker discuss clinical and preclinical evidence about the potential roles of GLP-1 medicines on cancer incidence, development and therapy and speculate about their mechanism on cancer cells and the tumor microenvironment.
Glucagon-like peptide-1 medicines and cancer
Nature Cancer, Published online: 16 January 2026; doi:10.1038/s43018-025-01110-1
Yabut and Drucker discuss clinical and preclinical evidence about the potential roles of GLP-1 medicines on cancer incidence, development and therapy and speculate about their mechanism on cancer cells and the tumor microenvironment.-
Nature Medicine
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Contaminating plasmid sequences and disrupted vector genomes in the liver following adeno-associated virus gene therapy
Nature Medicine, Published online: 16 January 2026; doi:10.1038/s41591-025-04073-zAnalyses of liver biopsies from a child with spinal muscular atrophy treated with adeno-associated virus gene therapy who developed hepatitis reveal contaminating manufacturing plasmids and disrupted vector genomes, possibly resulting from recombination events.
Contaminating plasmid sequences and disrupted vector genomes in the liver following adeno-associated virus gene therapy
Nature Medicine, Published online: 16 January 2026; doi:10.1038/s41591-025-04073-z
Analyses of liver biopsies from a child with spinal muscular atrophy treated with adeno-associated virus gene therapy who developed hepatitis reveal contaminating manufacturing plasmids and disrupted vector genomes, possibly resulting from recombination events.-
(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
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Clinical proteomics in cardiovascular medicine: Current capabilities, limitations, and future directions
Atherosclerosis. 2026 Jan 8;413:120637. doi: 10.1016/j.atherosclerosis.2026.120637. Online ahead of print.ABSTRACTBACKGROUND AND AIMS: Commercial high-throughput proteomics platforms, such as Olink and SomaLogic, enable large-scale epidemiological studies with integrated multi-omics measurements. While these proteomics approaches have been widely applied in biobanks, issues of data quality remain underappreciated. In this review, we discuss these limitations and outline a way forward for realizi
Clinical proteomics in cardiovascular medicine: Current capabilities, limitations, and future directions
Atherosclerosis. 2026 Jan 8;413:120637. doi: 10.1016/j.atherosclerosis.2026.120637. Online ahead of print.
ABSTRACT
BACKGROUND AND AIMS: Commercial high-throughput proteomics platforms, such as Olink and SomaLogic, enable large-scale epidemiological studies with integrated multi-omics measurements. While these proteomics approaches have been widely applied in biobanks, issues of data quality remain underappreciated. In this review, we discuss these limitations and outline a way forward for realizing the clinical translation of proteomics as a comprehensive 'liquid health check'.
METHODS: We reviewed the recent literature for artificial intelligence (AI) and multi-omics, particularly proteomics in atherosclerotic cardiovascular disease (ASCVD).
RESULTS: AI-driven multi-omics analyses have the potential to advance our understanding of multifactorial causes of ASCVD, including aging. Emerging concepts such as "ageotypes" suggest the potential for personalized intervention to slow aging processes. Commercial proteomics platforms have accelerated biomarker discovery in ASCVD, but challenges remain in clinical translation. Limited correlation between Olink and SomaLogic necessitates orthogonal validation of findings. Platform-specific issues, such as epitope effects and cross-reactivity, can yield divergent protein quantitative trait loci for the same protein, complicating causal inference. While tissue proteomics provides complementary insights to plasma proteomics, reliance on autopsy samples raises concerns about protein degradation and measurement reliability. Increasingly, single-cell and spatial proteomics are being explored to better capture plaque heterogeneity, complementing bulk proteomics in larger cohorts.
CONCLUSION: Beyond risk prediction, proteomics offers opportunities to elucidate disease mechanisms and enable drug repurposing. To realize the clinical potential of plasma proteomics, absolute or reliably recalibratable relative quantification will be required to guide patient care. Ultimately, the clinical value of proteomics will be determined by the quality rather than the quantity of protein measurements.
PMID:41539063 | DOI:10.1016/j.atherosclerosis.2026.120637
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Journal of Medical Internet Research
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βI Want to Spend My Time LivingββExperiences With a Digital Outpatient Service With a Mobile App for Tailored Care Among Adults With Long-Term Health Service Needs: Qualitative Study Using Thematic Analysis
Background: Digital health services are increasingly used in hospital-based outpatient care, offering remote monitoring, patient-reported outcomes, information sharing, and asynchronous communication. While expected to improve self-management, timeliness, and efficiency, the success of digital health interventions relies on patientsβ health literacy and digital health literacy. While some research has addressed potential associations between digital health interventions and patientsβ health outc
βI Want to Spend My Time LivingββExperiences With a Digital Outpatient Service With a Mobile App for Tailored Care Among Adults With Long-Term Health Service Needs: Qualitative Study Using Thematic Analysis
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MIT Technology Review
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Exclusive eBook: How AGI Became a Consequential Conspiracy Theory
In this exclusive subscriber-only eBook, youβll learn about how the idea that machines will be as smart asβor smarter thanβhumans has hijacked an entire industry.by Will Douglas Heaven October 30, 2025 ACCESS EBOOK Table of Contents: How Silicon Valley got AGI-pilled The great AGI conspiracy How AGI hijacked an industry The great AGI conspiracy, concluded Related Stories: How AGI became the most consequential conspiracy theory of our time The New Conspiracy Age
Exclusive eBook: How AGI Became a Consequential Conspiracy Theory
In this exclusive subscriber-only eBook, youβll learn about how the idea that machines will be as smart asβor smarter thanβhumans has hijacked an entire industry.
by Will Douglas Heaven October 30, 2025
Table of Contents:
- How Silicon Valley got AGI-pilled
- The great AGI conspiracy
- How AGI hijacked an industry
- The great AGI conspiracy, concluded
Related Stories:
Access all subscriber-only eBooks:
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(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
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Molecular features of early- vs. late-onset gastric cancer: a systematic review and meta-analysis
BMC Cancer. 2026 Jan 14. doi: 10.1186/s12885-026-15567-5. Online ahead of print.ABSTRACTBACKGROUND: Early-onset gastric cancer (EOGC), diagnosed before age 50, is characterized by distinct clinicopathological features, though its molecular landscape remains poorly defined.METHODS: A systematic literature search of PubMed, Embase, and Web of Science identified studies comparing molecular characteristics of EOGC and late-onset gastric cancer (LOGC). Meta-analyses assessed differences in The Cancer
Molecular features of early- vs. late-onset gastric cancer: a systematic review and meta-analysis
BMC Cancer. 2026 Jan 14. doi: 10.1186/s12885-026-15567-5. Online ahead of print.
ABSTRACT
BACKGROUND: Early-onset gastric cancer (EOGC), diagnosed before age 50, is characterized by distinct clinicopathological features, though its molecular landscape remains poorly defined.
METHODS: A systematic literature search of PubMed, Embase, and Web of Science identified studies comparing molecular characteristics of EOGC and late-onset gastric cancer (LOGC). Meta-analyses assessed differences in The Cancer Genome Atlas (TCGA) molecular subtypes, gene mutations, therapeutic biomarkers, and serum tumor markers. Odds ratios (ORs) with 95% confidence intervals (CIs) were calculated; heterogeneity was assessed using the I2 statistic.
RESULTS: EOGC was associated with a higher prevalence of the genomically stable (GS) subtype (OR = 1.71, 95% CI: 1.37-2.12) and a lower prevalence of the chromosomal instability (CIN) subtype (OR = 0.62, 95% CI: 0.50-0.77). CDH1 mutations were more frequent in EOGC (OR = 3.44, 95% CI: 2.85-4.16), while HER2 expression (OR = 0.54, 95% CI: 0.43-0.67), dMMR/MSI-H status (OR = 0.25, 95% CI: 0.12-0.53), and p53 expression (OR = 0.56, 95% CI: 0.39-0.82) were significantly lower. Serum markers including CEA and CA19-9 were also less frequently elevated in EOGC.
CONCLUSION: EOGC represents a biologically distinct subset of gastric cancer with unique genomic and immunological features. These findings support age-specific diagnostic approaches and emphasize the value of multiomic strategies to uncover the mechanisms driving early-onset disease.
PMID:41535782 | DOI:10.1186/s12885-026-15567-5
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cs.AI, q-bio.NC updates on arXiv.org
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ART: Action-based Reasoning Task Benchmarking for Medical AI Agents
arXiv:2601.08988v1 Announce Type: new Abstract: Reliable clinical decision support requires medical AI agents capable of safe, multi-step reasoning over structured electronic health records (EHRs). While large language models (LLMs) show promise in healthcare, existing benchmarks inadequately assess performance on action-based tasks involving threshold evaluation, temporal aggregation, and conditional logic. We introduce ART, an Action-based Reasoning clinical Task benchmark for medical AI agen
ART: Action-based Reasoning Task Benchmarking for Medical AI Agents
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cs.AI, q-bio.NC updates on arXiv.org
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Human-AI Co-design for Clinical Prediction Models
arXiv:2601.09072v1 Announce Type: new Abstract: Developing safe, effective, and practically useful clinical prediction models (CPMs) traditionally requires iterative collaboration between clinical experts, data scientists, and informaticists. This process refines the often small but critical details of the model building process, such as which features/patients to include and how clinical categories should be defined. However, this traditional collaboration process is extremely time- and resour
Human-AI Co-design for Clinical Prediction Models
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cs.AI, q-bio.NC updates on arXiv.org
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PrivacyReasoner: Can LLM Emulate a Human-like Privacy Mind?
arXiv:2601.09152v1 Announce Type: new Abstract: This paper introduces PRA, an AI-agent design for simulating how individual users form privacy concerns in response to real-world news. Moving beyond population-level sentiment analysis, PRA integrates privacy and cognitive theories to simulate user-specific privacy reasoning grounded in personal comment histories and contextual cues. The agent reconstructs each user's "privacy mind", dynamically activates relevant privacy memory through a context
PrivacyReasoner: Can LLM Emulate a Human-like Privacy Mind?
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cs.AI, q-bio.NC updates on arXiv.org
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Companion Agents: A Table-Information Mining Paradigm for Text-to-SQL
arXiv:2601.08838v1 Announce Type: cross Abstract: Large-scale Text-to-SQL benchmarks such as BIRD typically assume complete and accurate database annotations as well as readily available external knowledge, which fails to reflect common industrial settings where annotations are missing, incomplete, or erroneous. This mismatch substantially limits the real-world applicability of state-of-the-art (SOTA) Text-to-SQL systems. To bridge this gap, we explore a database-centric approach that leverages
Companion Agents: A Table-Information Mining Paradigm for Text-to-SQL
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cs.AI, q-bio.NC updates on arXiv.org
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Triples and Knowledge-Infused Embeddings for Clustering and Classification of Scientific Documents
arXiv:2601.08841v1 Announce Type: cross Abstract: The increasing volume and complexity of scientific literature demand robust methods for organizing and understanding research documents. In this study, we explore how structured knowledge, specifically, subject-predicate-object triples, can enhance the clustering and classification of scientific papers. We propose a modular pipeline that combines unsupervised clustering and supervised classification over multiple document representations: raw ab
Triples and Knowledge-Infused Embeddings for Clustering and Classification of Scientific Documents
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cs.AI, q-bio.NC updates on arXiv.org
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AI Deployment Authorisation: A Global Standard for Machine-Readable Governance of High-Risk Artificial Intelligence
arXiv:2601.08869v1 Announce Type: cross Abstract: Modern artificial intelligence governance lacks a formal, enforceable mechanism for determining whether a given AI system is legally permitted to operate in a specific domain and jurisdiction. Existing tools such as model cards, audits, and benchmark evaluations provide descriptive information about model behavior and training data but do not produce binding deployment decisions with legal or financial force. This paper introduces the AI Deploym
AI Deployment Authorisation: A Global Standard for Machine-Readable Governance of High-Risk Artificial Intelligence
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cs.AI, q-bio.NC updates on arXiv.org
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From Symbolic to Natural-Language Relations: Rethinking Knowledge Graph Construction in the Era of Large Language Models
arXiv:2601.09069v1 Announce Type: cross Abstract: Knowledge graphs (KGs) have commonly been constructed using predefined symbolic relation schemas, typically implemented as categorical relation labels. This design has notable shortcomings: real-world relations are often contextual, nuanced, and sometimes uncertain, and compressing it into discrete relation labels abstracts away critical semantic detail. Nevertheless, symbolic-relation KGs remain widely used because they have been operationally