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cs.AI, q-bio.NC updates on arXiv.org
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Grokking as Dimensional Phase Transition in Neural Networks
arXiv:2604.04655v1 Announce Type: cross Abstract: Neural network grokking -- the abrupt memorization-to-generalization transition -- challenges our understanding of learning dynamics. Through finite-size scaling of gradient avalanche dynamics across eight model scales, we find that grokking is a \textit{dimensional phase transition}: effective dimensionality~$D$ crosses from sub-diffusive (subcritical, $D 1$) at generalization onset, exhibiting self-organized criticality (SOC). Crucially, $D$
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(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
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Overcoming missing data in spatial metabolomics with machine learning imputation to accelerate downstream discovery
iScience. 2026 Mar 3;29(4):115203. doi: 10.1016/j.isci.2026.115203. eCollection 2026 Apr 17.ABSTRACTMass spectrometry imaging (MSI)-based spatial metabolomics exhibits extensive missing values; yet, practical guidance on how imputation choices affect both imputation accuracy and downstream spatial analyses remains limited. In this study, we evaluated eight imputation methods, including both existing approaches and a graph convolutional network (GCN)-based method specifically designed for spatial
Overcoming missing data in spatial metabolomics with machine learning imputation to accelerate downstream discovery
iScience. 2026 Mar 3;29(4):115203. doi: 10.1016/j.isci.2026.115203. eCollection 2026 Apr 17.
ABSTRACT
Mass spectrometry imaging (MSI)-based spatial metabolomics exhibits extensive missing values; yet, practical guidance on how imputation choices affect both imputation accuracy and downstream spatial analyses remains limited. In this study, we evaluated eight imputation methods, including both existing approaches and a graph convolutional network (GCN)-based method specifically designed for spatial metabolomics data, to identify suitable approaches for spatial metabolomics. To enable comprehensive assessment, we developed an evaluation framework focusing on two objective criteria: (a) imputation accuracy and (b) preservation of spatial cluster structure. We assembled six benchmark datasets spanning mouse brain and liver, human kidney and stomach, and plant seed sections, and conducted controlled dropout simulations of missing values. Across both evaluation dimensions, including imputation accuracy and preservation of spatial cluster structure, RF ranked first overall, and GCN ranked second in both dimensions. Overall, this systematic, dual-perspective benchmark study provides guidance for selecting imputation strategies in spatial metabolomics research.
PMID:41869568 | PMC:PMC12999350 | DOI:10.1016/j.isci.2026.115203
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cs.AI, q-bio.NC updates on arXiv.org
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Hierarchical Dual-Change Collaborative Learning for UAV Scene Change Captioning
arXiv:2603.12832v1 Announce Type: cross Abstract: This paper proposes a novel task for UAV scene understanding - UAV Scene Change Captioning (UAV-SCC) - which aims to generate natural language descriptions of semantic changes in dynamic aerial imagery captured from a movable viewpoint. Unlike traditional change captioning that mainly describes differences between image pairs captured from a fixed camera viewpoint over time, UAV scene change captioning focuses on image-pair differences resulting