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DC vaccine loaded with Bacteroides fragilis elicits functional cross-reactivity and enhances anti-PD-1 immunotherapy

Liu and colleagues develop a dendritic cell vaccine loaded with the gut commensals Bacteroides fragilis (DC-Bf), which triggers CD8+ T cell-dependent antitumor immune responses via MHC-I-mediated cross-presentation and interleukin-12 secretion, and enhances the efficacy of PD-1 antibody by improving the immunosuppressive tumor microenvironment and diversifying the T cell receptor repertoire.

Towards trustworthy agentic AI: a comprehensive survey of safety, robustness, privacy, and system security

arXiv:2605.23989v1 Announce Type: new Abstract: Agentic AI systems -- Large Language Models (LLMs) augmented with planning, tool use, memory, and long-horizon interactions -- can execute complex tasks autonomously, but their multi-step trajectories introduce new failure modes that challenge trustworthiness. This survey provides a focused examination of trustworthy agentic AI through two core dimensions that are critical for high-risk deployments: Safety and Robustness, and Privacy and System Security. For each dimension, we clarify key concepts, identify where risks emerge along the agent workflow, and summarize stage-targeted mitigation strategies. Other trustworthiness aspects (value alignment, transparency, fairness, and accountability) are discussed as relevant context rather than parallel chapters. To support consistent comparison and deployment decisions, we consolidate evaluation into a unified metrics-and-benchmarks hub, emphasizing both outcome and process signals (e.g., constraint violations, trace completeness, and adversarial success rates) and offering scenario-to-metric guidance for release gating. We conclude by outlining open challenges such as self-evolving agents, runtime monitoring and verification, privacy-preserving personalization, and the trust-utility trade-off, and present a case study of real-world security failures in open-source agentic systems. Our goal is to serve as a practical reference for researchers and practitioners building trustworthy agentic systems in high-stakes environments.

InCoder-32B: Code Foundation Model for Industrial Scenarios

arXiv:2603.16790v3 Announce Type: replace-cross Abstract: Recent code large language models have achieved remarkable progress on general programming tasks. Nevertheless, their performance degrades significantly in industrial scenarios that require reasoning about hardware semantics, specialized language constructs, and strict resource constraints. To address these challenges, we introduce InCoder-32B (Industrial-Coder-32B), the first 32B-parameter code foundation model unifying code intelligence across chip design, GPU kernel optimization, embedded systems, compiler optimization, and 3D modeling. By adopting an efficient architecture, we train InCoder-32B from scratch with general code pre-training, curated industrial code annealing, mid-training that progressively extends context from 8K to 128K tokens with synthetic industrial reasoning data, and post-training with execution-grounded verification. We conduct extensive evaluation on 14 mainstream general code benchmarks and 9 industrial benchmarks spanning 4 specialized domains. Results show InCoder-32B achieves highly competitive performance on general tasks while establishing strong open-source baselines across industrial domains.

RFC4 drives temozolomide resistance in glioblastoma by activating STK38-BECN1-dependent autophagy

Nat Commun. 2026 Mar 23. doi: 10.1038/s41467-026-70798-1. Online ahead of print.

ABSTRACT

Glioblastoma (GBM) remains a lethal brain tumor due to therapy resistance. While autophagy contributes to temozolomide (TMZ) resistance, its regulation is incompletely understood. This study investigates the role of replication factor RFC4, which is associated with poor prognosis and TMZ resistance in GBM. Multi-omics analyses and molecular experiments reveal that TMZ-induced chromatin accessibility enables transcription factor YY1 to bind the RFC4 promoter and upregulate its expression. RFC4, in turn, stabilizes the kinase STK38, which is essential for autophagosome formation. The RFC4-STK38 interaction facilitates BECN1 recruitment, thereby activating autophagy. Phosphorylation of STK38 at T444 stabilizes this complex, whereas a phospho-deficient mutant impairs autophagy. In vivo, RFC4 overexpression confers TMZ resistance, reversible by autophagy inhibition. Thus, our findings identify the RFC4-STK38-BECN1 axis as a mechanism underlying TMZ resistance and a potential target for precision therapy in GBM.

PMID:41872171 | DOI:10.1038/s41467-026-70798-1

DARC: Disagreement-Aware Alignment via Risk-Constrained Decoding

arXiv:2603.08145v1 Announce Type: cross Abstract: Preference-based alignment methods (e.g., RLHF, DPO) typically optimize a single scalar objective, implicitly averaging over heterogeneous human preferences. In practice, systematic annotator and user-group disagreement makes mean-reward maximization brittle and susceptible to proxy over-optimization. We propose **Disagreement-Aware Alignment via Risk-Constrained Decoding (DARC)**, a retraining-free inference-time method that frames response selection as distributionally robust, risk-sensitive decision making. Given multiple preference samples or scalable disagreement proxies, DARC reranks candidates by maximizing a *KL-robust (entropic)* satisfaction objective, and provides simple deployment controls that cap or penalize the corresponding entropic risk premium relative to the mean, enabling explicit risk budgets without retraining. We provide theoretical characterization linking this decoding rule to principled pessimism and KL-based distributionally robust optimization. Experiments on alignment benchmarks show that DARC reduces disagreement and tail risk while maintaining competitive average quality under noisy, heterogeneous feedback.

Efficient Semi-Supervised Adversarial Training via Latent Clustering-Based Data Reduction

arXiv:2501.10466v4 Announce Type: replace-cross Abstract: Learning robust models under adversarial settings is widely recognized as requiring a considerably large number of training samples. Recent work proposes semi-supervised adversarial training (SSAT), which utilizes external unlabeled or synthetically generated data and is currently the state of the art. However, SSAT requires substantial extra data to attain high robustness, resulting in prolonged training time and increased memory usage. In this paper, we propose data reduction strategies to improve the efficiency of SSAT by optimizing the amount of additional data incorporated. Specifically, we design novel latent clustering-based techniques to select or generate a small, critical subset of data samples near the model's decision boundary. While focusing on boundary-adjacent points, our methods maintain a balanced ratio between boundary and non-boundary data points, thereby avoiding overfitting. Comprehensive experiments across image benchmarks demonstrate that our methods can effectively reduce SSAT's data requirements and computational costs while preserving its strong robustness advantages. In particular, our latent-space selection scheme based on k-means clustering and our guided diffusion-based approach with LCG-KM are the most effective, achieving nearly identical robust accuracies with 5 times to 10 times less unlabeled data. When compared to full SSAT trained to convergence, our methods reduce total runtime by approximately 3 times to 4 times due to strategic prioritization of unlabeled data.

Discern Truth from Falsehood: Reducing Over-Refusal via Contrastive Refinement

arXiv:2603.03323v1 Announce Type: cross Abstract: Large language models (LLMs) aligned for safety often suffer from over-refusal, the tendency to reject seemingly toxic or benign prompts by misclassifying them as toxic. This behavior undermines models' helpfulness and restricts usability in sensitive or nuanced contexts. While prior work has proposed mitigation strategies such as data augmentation and activation steering, these approaches often face a trade-off: reducing over-refusal typically degrades the model's ability to reject genuinely harmful content. We argue that this issue arises from the ambiguous influence of toxic and seemingly toxic prompts on the model's learning dynamics. To address it, we introduce a preceding alignment stage, DCR: Discernment via Contrastive Refinement. Both theoretically and empirically, we demonstrate that contrastive refinement improves an LLM's capacity to distinguish truly toxic prompts from superficially toxic ones. Evaluation across diverse benchmarks shows that our method effectively reduces over-refusal while preserving the safety benefits of alignment. Importantly, it achieves this with minimal degradation of general capabilities, offering a more principled and robust direction for safety alignment.
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