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IDEA2: Expert-in-the-loop competency question elicitation for collaborative ontology engineering

arXiv:2604.01344v1 Announce Type: new Abstract: Competency question (CQ) elicitation represents a critical but resource-intensive bottleneck in ontology engineering. This foundational phase is often hampered by the communication gap between domain experts, who possess the necessary knowledge, and ontology engineers, who formalise it. This paper introduces IDEA2, a novel, semi-automated workflow that integrates Large Language Models (LLMs) within a collaborative, expert-in-the-loop process to address this challenge. The methodology is characterised by a core iterative loop: an initial LLM-based extraction of CQs from requirement documents, a co-creational review and feedback phase by domain experts on an accessible collaborative platform, and an iterative, feedback-driven reformulation of rejected CQs by an LLM until consensus is achieved. To ensure transparency and reproducibility, the entire lifecycle of each CQ is tracked using a provenance model that captures the full lineage of edits, anonymised feedback, and generation parameters. The workflow was validated in 2 real-world scenarios (scientific data, cultural heritage), demonstrating that IDEA2 can accelerate the requirements engineering process, improve the acceptance and relevance of the resulting CQs, and exhibit high usability and effectiveness among domain experts. We release all code and experiments at https://github.com/KE-UniLiv/IDEA2
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CRaFT: Circuit-Guided Refusal Feature Selection via Cross-Layer Transcoders

arXiv:2604.01604v1 Announce Type: new Abstract: As safety concerns around large language models (LLMs) grow, understanding the internal mechanisms underlying refusal behavior has become increasingly important. Recent work has studied this behavior by identifying internal features associated with refusal and manipulating them to induce compliance with harmful requests. However, existing refusal feature selection methods rely on how strongly features activate on harmful prompts, which tends to capture superficial signals rather than the causal factors underlying the refusal decision. We propose CRaFT, a circuit-guided refusal feature selection framework that ranks features by their influence on the model's refusal-compliance decision using prompts near the refusal boundary. On Gemma-3-1B-it, CRaFT improves attack success rate (ASR) from 6.7% to 48.2% and outperforms baseline methods across multiple jailbreak benchmarks. These results suggest that circuit influence is a more reliable criterion than activation magnitude for identifying features that causally mediate refusal behavior.
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The AnIML Ontology: Enabling Semantic Interoperability for Large-Scale Experimental Data in Interconnected Scientific Labs

arXiv:2604.01728v1 Announce Type: new Abstract: Achieving semantic interoperability across heterogeneous experimental data systems remains a major barrier to data-driven scientific discovery. The Analytical Information Markup Language (AnIML), a flexible XML-based standard for analytical chemistry and biology, is increasingly used in industrial R&D labs for managing and exchanging experimental data. However, the expressivity of the XML schema permits divergent interpretations across stakeholders, introducing inconsistencies that undermine the interoperability the AnIML schema was designed to support. In this paper, we present the AnIML Ontology, an OWL 2 ontology that formalises the semantics of AnIML and aligns it with the Allotrope Data Format to support future cross-system and cross-lab interoperability. The ontology was developed using an expert-in-the-loop approach combining LLM-assisted requirement elicitation with collaborative ontology engineering. We validate the ontology through a multi-layered approach: data-driven transformation of real-world AnIML files into knowledge graphs, competency question verification via SPARQL, and a novel validation protocol based on adversarial negative competency questions mapped to established ontological anti-patterns and enforced via SHACL constraints.
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NEMESIS: Noise-suppressed Efficient MAE with Enhanced Superpatch Integration Strategy

arXiv:2604.01612v1 Announce Type: cross Abstract: Volumetric CT imaging is essential for clinical diagnosis, yet annotating 3D volumes is expensive and time-consuming, motivating self-supervised learning (SSL) from unlabeled data. However, applying SSL to 3D CT remains challenging due to the high memory cost of full-volume transformers and the anisotropic spatial structure of CT data, which is not well captured by conventional masking strategies. We propose NEMESIS, a masked autoencoder (MAE) framework that operates on local 128x128x128 superpatches, enabling memory-efficient training while preserving anatomical detail. NEMESIS introduces three key components: (i) noise-enhanced reconstruction as a pretext task, (ii) Masked Anatomical Transformer Blocks (MATB) that perform dual-masking through parallel plane-wise and axis-wise token removal, and (iii) NEMESIS Tokens (NT) for cross-scale context aggregation. On the BTCV multi-organ classification benchmark, NEMESIS with a frozen backbone and a linear classifier achieves a mean AUROC of 0.9633, surpassing fully fine-tuned SuPreM (0.9493) and VoCo (0.9387). Under a low-label regime with only 10% of available annotations, it retains an AUROC of 0.9075, demonstrating strong label efficiency. Furthermore, the superpatch-based design reduces computational cost to 31.0 GFLOPs per forward pass, compared to 985.8 GFLOPs for the full-volume baseline, providing a scalable and robust foundation for 3D medical imaging.
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CANDI: Curated Test-Time Adaptation for Multivariate Time-Series Anomaly Detection Under Distribution Shift

arXiv:2604.01845v1 Announce Type: cross Abstract: Multivariate time-series anomaly detection (MTSAD) aims to identify deviations from normality in multivariate time-series and is critical in real-world applications. However, in real-world deployments, distribution shifts are ubiquitous and cause severe performance degradation in pre-trained anomaly detector. Test-time adaptation (TTA) updates a pre-trained model on-the-fly using only unlabeled test data, making it promising for addressing this challenge. In this study, we propose CANDI (Curated test-time adaptation for multivariate time-series ANomaly detection under DIstribution shift), a novel TTA framework that selectively identifies and adapts to potential false positives while preserving pre-trained knowledge. CANDI introduces a False Positive Mining (FPM) strategy to curate adaptation samples based on anomaly scores and latent similarity, and incorporates a plug-and-play Spatiotemporally-Aware Normality Adaptation (SANA) module for structurally informed model updates. Extensive experiments demonstrate that CANDI significantly improves the performance of MTSAD under distribution shift, improving AUROC up to 14% while using fewer adaptation samples.
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Mining Instance-Centric Vision-Language Contexts for Human-Object Interaction Detection

arXiv:2604.02071v1 Announce Type: cross Abstract: Human-Object Interaction (HOI) detection aims to localize human-object pairs and classify their interactions from a single image, a task that demands strong visual understanding and nuanced contextual reasoning. Recent approaches have leveraged Vision-Language Models (VLMs) to introduce semantic priors, significantly improving HOI detection performance. However, existing methods often fail to fully capitalize on the diverse contextual cues distributed across the entire scene. To overcome these limitations, we propose the Instance-centric Context Mining Network (InCoM-Net)-a novel framework that effectively integrates rich semantic knowledge extracted from VLMs with instance-specific features produced by an object detector. This design enables deeper interaction reasoning by modeling relationships not only within each detected instance but also across instances and their surrounding scene context. InCoM-Net comprises two core components: Instancecentric Context Refinement (ICR), which separately extracts intra-instance, inter-instance, and global contextual cues from VLM-derived features, and Progressive Context Aggregation (ProCA), which iteratively fuses these multicontext features with instance-level detector features to support high-level HOI reasoning. Extensive experiments on the HICO-DET and V-COCO benchmarks show that InCoM-Net achieves state-of-the-art performance, surpassing previous HOI detection methods. Code is available at https://github.com/nowuss/InCoM-Net.
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The Expert Strikes Back: Interpreting Mixture-of-Experts Language Models at Expert Level

arXiv:2604.02178v1 Announce Type: cross Abstract: Mixture-of-Experts (MoE) architectures have become the dominant choice for scaling Large Language Models (LLMs), activating only a subset of parameters per token. While MoE architectures are primarily adopted for computational efficiency, it remains an open question whether their sparsity makes them inherently easier to interpret than dense feed-forward networks (FFNs). We compare MoE experts and dense FFNs using $k$-sparse probing and find that expert neurons are consistently less polysemantic, with the gap widening as routing becomes sparser. This suggests that sparsity pressures both individual neurons and entire experts toward monosemanticity. Leveraging this finding, we zoom out from the neuron to the expert level as a more effective unit of analysis. We validate this approach by automatically interpreting hundreds of experts. This analysis allows us to resolve the debate on specialization: experts are neither broad domain specialists (e.g., biology) nor simple token-level processors. Instead, they function as fine-grained task experts, specializing in linguistic operations or semantic tasks (e.g., closing brackets in LaTeX). Our findings suggest that MoEs are inherently interpretable at the expert level, providing a clearer path toward large-scale model interpretability. Code is available at: https://github.com/jerryy33/MoE_analysis
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Neuro-RIT: Neuron-Guided Instruction Tuning for Robust Retrieval-Augmented Language Model

arXiv:2604.02194v1 Announce Type: cross Abstract: Retrieval-Augmented Language Models (RALMs) have demonstrated significant potential in knowledge-intensive tasks; however, they remain vulnerable to performance degradation when presented with irrelevant or noisy retrieved contexts. Existing approaches to enhance robustness typically operate via coarse-grained parameter updates at the layer or module level, often overlooking the inherent neuron-level sparsity of Large Language Models (LLMs). To address this limitation, we propose Neuro-RIT (Neuron-guided Robust Instruction Tuning), a novel framework that shifts the paradigm from dense adaptation to precision-driven neuron alignment. Our method explicitly disentangles neurons that are responsible for processing relevant versus irrelevant contexts using attribution-based neuron mining. Subsequently, we introduce a two-stage instruction tuning strategy that enforces a dual capability for noise robustness: achieving direct noise suppression by functionally deactivating neurons exclusive to irrelevant contexts, while simultaneously optimizing targeted layers for evidence distillation. Extensive experiments across diverse QA benchmarks demonstrate that Neuro-RIT consistently outperforms strong baselines and robustness-enhancing methods.
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AutiHero: Engaging Parents in Creating Personalized, Multi-path~Social Narratives for Autistic Children

arXiv:2509.17608v2 Announce Type: replace-cross Abstract: Social narratives help autistic children understand and navigate social situations through stories. To ensure effective practice, however, they often require significant time and effort from parents in customizing the narrative materials and delivering repeated instructions on them. We present AutiHero, a generative AI (GenAI)-based social narrative system, which supports parents to create personalized, multi-path stories targeting specific behavior of their autistic children, while enabling them to explore behavioral choices and causal consequences together in reading. A two-week deployment study with 16 autistic child-parent dyads showed that parents actively created, adapted, and read stories with their children, with increased confidence in everyday behavioral guidance. Our work contributes real-world-contextualized text+image content creation approaches harnessing GenAI, ensuring user-aligned application in sensitive contexts involving autistic children and their parents.
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Molmo2: Open Weights and Data for Vision-Language Models with Video Understanding and Grounding

arXiv:2601.10611v4 Announce Type: replace-cross Abstract: Today's strongest video-language models (VLMs) remain proprietary. The strongest open-weight models either rely on synthetic data from proprietary VLMs, effectively distilling from them, or do not disclose their training data or recipe. As a result, the open-source community lacks the foundations needed to improve on the state-of-the-art video (and image) language models. Crucially, many downstream applications require more than just high-level video understanding; they require grounding -- either by pointing or by tracking in pixels. Even proprietary models lack this capability. We present Molmo2, a new family of VLMs that are state-of-the-art among open-source models and demonstrate exceptional new capabilities in point-driven grounding in single image, multi-image, and video tasks. Our key contribution is a collection of 7 new video datasets and 2 multi-image datasets, including a dataset of highly detailed video captions for pre-training, a free-form video Q&A dataset for fine-tuning, a new object tracking dataset with complex queries, and an innovative new video pointing dataset, all collected without the use of closed VLMs. We also present a training recipe for this data utilizing an efficient packing and message-tree encoding scheme, and show bi-directional attention on vision tokens and a novel token-weight strategy improves performance. Our best-in-class 8B model outperforms others in the class of open weight and data models on short videos, counting, and captioning, and is competitive on long-videos. On video-grounding Molmo2 significantly outperforms existing open-weight models like Qwen3-VL (35.5 vs 29.6 accuracy on video counting) and surpasses proprietary models like Gemini 3 Pro on some tasks (38.4 vs 20.0 F1 on video pointing and 56.2 vs 41.1 J&F on video tracking).
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