Transposable element exonization by unannotated splicing events produces stable protein isoforms with acquired functions that are subject to evolutionary selection.

Advances in AI and omics enable the creation of AI virtual cells (AIVCs)—multi-scale, multimodal neural network models that simulate molecules, cells, and tissues across diverse states. This vision outlines their design and collaborative development, promising to transform biological research through high-fidelity simulations, accelerating discoveries, and fostering interdisciplinary open science collaborations.

Nature, Published online: 23 December 2024; doi:10.1038/s41586-024-08555-x

Author Correction: π-HuB: the proteomic navigator of the human body

Nature, Published online: 18 December 2024; doi:10.1038/s41586-024-08333-9

Motif grammar on nucleosome fibres acts as signpost elements, directing TF combinatorial binding to enhancers.

Nature, Published online: 15 May 2024; doi:10.1038/s41586-024-07302-6

This Review discusses the importance of genetic and non-genetic reprogramming events during the metastatic cascade.

Cancer is a systemic disease in more than one dimension, in terms of its evolutionary course, direct crosstalk with the microenvironment, and intricate communication with the macro-environment. This broad perspective encompasses our understanding of cancer’s systemic features, mapping out the path for tackling its complexity to bridge what we can learn and who we need to help.

Nature, Published online: 13 March 2024; doi:10.1038/s41586-024-07177-7

We uncover key processes of the genomic evolution of small cell lung cancer under therapy, identify the common ancestor as the source of clonal diversity at relapse and show central genomic patterns associated with drug response.

Cell Death Discovery, Published online: 13 March 2024; doi:10.1038/s41420-024-01863-1

Ferroptosis: a new hunter of hepatocellular carcinoma

Nature, Published online: 06 March 2024; doi:10.1038/s41586-024-07148-y

A meta-analysis of genome-wide association studies for 233 circulating metabolites from 33 cohorts reveals more than 400 loci and suggests probable causal genes, providing insights into metabolic pathways and disease aetiology.

Immunotherapy holds strong promise for cancer treatment but at present benefits only a small proportion of cases. A pan-cancer analysis of the immune landscape in more than 1,000 tumors across ten cancer types reveals immune surveillance and immune evasion mechanisms as well as potential molecular target that could augment future immunotherapy and precision medicine strategies.

Dietary intake of n-3 polyunsaturated fatty acids (PUFA) may have a protective effect on the development of cardiovascular diseases, diabetes, depression and cancer, while a high intake of n-6 PUFA was often r...

Nature, Published online: 08 February 2024; doi:10.1038/s41586-024-07051-6

Author Correction: Genotyping, sequencing and analysis of 140,000 adults from Mexico City

Nature, Published online: 31 January 2024; doi:10.1038/s41586-023-06984-8

The slow maturation of human neurons is regulated by epigenetic modification in nascent neurons, mediated by EZH2, EHMT1, EHMT2 and DOT1L.

Pancreatic ductal adenocarcinoma (PDAC) is an aggressive cancer with poor prognosis. It is marked by extraordinary resistance to conventional therapies including chemotherapy and radiation, as well as to essen...

Nature, Published online: 15 January 2024; doi:10.1038/s41586-024-07050-7

Author Correction: A genomic mutational constraint map using variation in 76,156 human genomes

Nature, Published online: 20 December 2023; doi:10.1038/s41586-023-06857-0

Mitochondria have a pivotal role in the transport of dietary lipids in enterocytes, a finding that might have relevance to understanding the aberrant gastrointestinal function in patients with mitochondrial disorders.

Nature, Published online: 31 October 2023; doi:10.1038/d41586-023-03316-8

Artificial-intelligence tools are transforming data-driven science — better ethical standards and more robust data curation are needed to fuel the boom and prevent a bust.

Nature Biotechnology, Published online: 23 October 2023; doi:10.1038/s41587-023-01964-9

Compressed Perturb-seq incorporates compressed sensing to genetic screening for scalable discovery of genetic interactions.

B vitamins such as folate (B9), B6, and B12 are key in one carbon metabolism, which generates methyl donors for DNA methylation. Several studies have linked differential methylation to self-reported intakes of...

Nature Biotechnology, Published online: 18 October 2023; doi:10.1038/s41587-023-02025-x

Author Correction: Enhancing untargeted metabolomics using metadata-based source annotation