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XTC, A Research Platform for Optimizing AI Workload Operators
First, do NOHARM: towards clinically safe large language models
A Multicenter Benchmark of Multiple Instance Learning Models for Lymphoma Subtyping from HE-stained Whole Slide Images
Generating Reliable Synthetic Clinical Trial Data: The Role of Hyperparameter Optimization and Domain Constraints
Data Visualization Support for Interdisciplinary Team Treatment Planning in Clinical Oncology: Scoping Review
XR-DT: Extended Reality-Enhanced Digital Twin for Agentic Mobile Robots
A Definition of AGI
Rethinking Lung Cancer Screening: AI Nodule Detection and Diagnosis Outperforms Radiologists, Leading Models, and Standards Beyond Size and Growth
Human Decision-making is Susceptible to AI-driven Manipulation
Latent plasticity of the human pancreas across development, health, and disease
bioRxiv [Preprint]. 2025 Oct 3:2025.10.01.679230. doi: 10.1101/2025.10.01.679230.
ABSTRACT
The pancreas plays a central role in major human diseases, yet our understanding of its cellular diversity and plasticity remains incomplete. Here, we present a single-cell multiomics atlas of the human pancreas, profiling over four million cells and nuclei from 57 donors across fetal development, adult homeostasis, and type 2 diabetes (T2D). Integrating sc/snRNA-seq, snATAC-seq, VASA-seq, spatial transcriptomics (Xenium), and multiplexed proteomics (CODEX), we resolve gene expression, chromatin accessibility, and spatial organization at high resolution. We identify transcriptionally plastic centroacinar-like cells (pCACs) in adults with fetal-like features, delineate endocrine and exocrine lineage trajectories during development, and uncover HNF1A-defined beta cell epigenetic states. In T2D, we observe shifts in beta cell subtypes and altered regulatory programs. Glucose perturbation of healthy islets reveals cell-type-specific adaptation and stress responses. This atlas provides a foundational framework to understand pancreas biology and the role of cellular plasticity in regeneration and disease.
PMID:41256699 | PMC:PMC12622017 | DOI:10.1101/2025.10.01.679230
CLINB: A Climate Intelligence Benchmark for Foundational Models
End to End AI System for Surgical Gesture Sequence Recognition and Clinical Outcome Prediction
Speculative Decoding in Decentralized LLM Inference: Turning Communication Latency into Computation Throughput
Author Correction: Global burden of chikungunya virus infections and the potential benefit of vaccination campaigns
Nature Medicine, Published online: 10 November 2025; doi:10.1038/s41591-025-04065-z
Author Correction: Global burden of chikungunya virus infections and the potential benefit of vaccination campaignsPublisher Correction: Deep-learning-based virtual screening of antibacterial compounds
Nature Biotechnology, Published online: 07 November 2025; doi:10.1038/s41587-025-02941-0
Publisher Correction: Deep-learning-based virtual screening of antibacterial compoundsA multimodal whole-slide foundation model for pathology
Nature Medicine, Published online: 05 November 2025; doi:10.1038/s41591-025-03982-3
Pretrained using 335,645 whole-slide images, a foundation model is developed to provide representations for slide- and patient-level tasks. It is capable of performing clinical tasks and generating reports even in data-scarce scenarios, such as rare cancer diagnosis and survival prediction, without requiring further fine-tuning.