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Ensuring multiomics data reproducibility for artificial intelligence with reference materials as a common calibrator

Nature Biotechnology, Published online: 01 September 2026; doi:10.1038/s41587-026-03267-1

Reference materials should be adopted as a common calibrator for multiomics measurement and co‑profiled with study samples. Multiomics results should be reported as sample‑to‑reference ratios so that they are reproducible and suitable for artificial intelligence tools.
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Unbalanced Incomplete Multi-view Clustering via the Scheme of View Evolution: Weak Views are Meat; Strong Views do Eat

arXiv:2011.10254v3 Announce Type: replace-cross Abstract: Incomplete multi-view clustering is an important technique to deal with real-world incomplete multi-view data. Previous works assume that all views have the same incompleteness, i.e., balanced incompleteness. However, different views often have distinct incompleteness, i.e., unbalanced incompleteness, which results in strong views (low-incompleteness views) and weak views (high-incompleteness views). The unbalanced incompleteness prevents us from directly using the previous methods for clustering. In this paper, inspired by the effective biological evolution theory, we design the novel scheme of view evolution to cluster strong and weak views. Moreover, we propose an Unbalanced Incomplete Multi-view Clustering method (UIMC), which is the first effective method based on view evolution for unbalanced incomplete multi-view clustering. Compared with previous methods, UIMC has two unique advantages: 1) it proposes weighted multi-view subspace clustering to integrate these unbalanced incomplete views, which effectively solves the unbalanced incomplete multi-view problem; 2) it designs the low-rank and robust representation to recover the data, which diminishes the impact of the incompleteness and noises. Extensive experimental results demonstrate that UIMC improves the clustering performance by up to 40% on three evaluation metrics over other state-of-the-art methods.
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Double Self-weighted Multi-view Clustering via Adaptive View Fusion

arXiv:2011.10396v3 Announce Type: replace-cross Abstract: Multi-view clustering has been applied in many real-world applications where original data often contain noises. Some graph-based multi-view clustering methods have been proposed to try to reduce the negative influence of noises. However, previous graph-based multi-view clustering methods treat all features equally even if there are redundant features or noises, which is obviously unreasonable. In this paper, we propose a novel multi-view clustering framework Double Self-weighted Multi-view Clustering (DSMC) to overcome the aforementioned deficiency. DSMC performs double self-weighted operations to remove redundant features and noises from each graph, thereby obtaining robust graphs. For the first self-weighted operation, it assigns different weights to different features by introducing an adaptive weight matrix, which can reinforce the role of the important features in the joint representation and make each graph robust. For the second self-weighting operation, it weights different graphs by imposing an adaptive weight factor, which can assign larger weights to more robust graphs. Furthermore, by designing an adaptive multiple graphs fusion, we can fuse the features in the different graphs to integrate these graphs for clustering. Experiments on six real-world datasets demonstrate its advantages over other state-of-the-art multi-view clustering methods.
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Multi-Modal Cross-Domain Alignment Network for Video Moment Retrieval

arXiv:2209.11572v3 Announce Type: replace-cross Abstract: As an increasingly popular task in multimedia information retrieval, video moment retrieval (VMR) aims to localize the target moment from an untrimmed video according to a given language query. Most previous methods depend heavily on numerous manual annotations (i.e., moment boundaries), which are extremely expensive to acquire in practice. In addition, due to the domain gap between different datasets, directly applying these pre-trained models to an unseen domain leads to a significant performance drop. In this paper, we focus on a novel task: cross-domain VMR, where fully-annotated datasets are available in one domain (``source domain''), but the domain of interest (``target domain'') only contains unannotated datasets. As far as we know, we present the first study on cross-domain VMR. To address this new task, we propose a novel Multi-Modal Cross-Domain Alignment (MMCDA) network to transfer the annotation knowledge from the source domain to the target domain. However, due to the domain discrepancy between the source and target domains and the semantic gap between videos and queries, directly applying trained models to the target domain generally leads to a performance drop. To solve this problem, we develop three novel modules: (i) a domain alignment module is designed to align the feature distributions between different domains of each modality; (ii) a cross-modal alignment module aims to map both video and query features into a joint embedding space and to align the feature distributions between different modalities in the target domain; (iii) a specific alignment module tries to obtain the fine-grained similarity between a specific frame and the given query for optimal localization. By jointly training these three modules, our MMCDA can learn domain-invariant and semantic-aligned cross-modal representations.
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You Can Ground Earlier than See: An Effective and Efficient Pipeline for Temporal Sentence Grounding in Compressed Videos

arXiv:2303.07863v3 Announce Type: replace-cross Abstract: Given an untrimmed video, temporal sentence grounding (TSG) aims to locate a target moment semantically according to a sentence query. Although previous respectable works have made decent success, they only focus on high-level visual features extracted from the consecutive decoded frames and fail to handle the compressed videos for query modelling, suffering from insufficient representation capability and significant computational complexity during training and testing. In this paper, we pose a new setting, compressed-domain TSG, which directly utilizes compressed videos rather than fully-decompressed frames as the visual input. To handle the raw video bit-stream input, we propose a novel Three-branch Compressed-domain Spatial-temporal Fusion (TCSF) framework, which extracts and aggregates three kinds of low-level visual features (I-frame, motion vector and residual features) for effective and efficient grounding. Particularly, instead of encoding the whole decoded frames like previous works, we capture the appearance representation by only learning the I-frame feature to reduce delay or latency. Besides, we explore the motion information not only by learning the motion vector feature, but also by exploring the relations of neighboring frames via the residual feature. In this way, a three-branch spatial-temporal attention layer with an adaptive motion-appearance fusion module is further designed to extract and aggregate both appearance and motion information for the final grounding. Experiments on three challenging datasets shows that our TCSF achieves better performance than other state-of-the-art methods with lower complexity.
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