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HarmonyCell: Automating Single-Cell Perturbation Modeling under Semantic and Distribution Shifts

arXiv:2603.01396v2 Announce Type: replace Abstract: Single-cell perturbation studies face dual heterogeneity bottlenecks: (i) semantic heterogeneity--identical biological concepts encoded under incompatible metadata schemas across datasets; and (ii) statistical heterogeneity--distribution shifts from biological variation demanding dataset-specific inductive biases. We propose HarmonyCell, an end-to-end agent framework resolving each challenge through a dedicated mechanism: an LLM-driven Semantic Unifier autonomously maps disparate metadata into a canonical interface without manual intervention; and an adaptive Monte Carlo Tree Search engine operates over a hierarchical action space to synthesize architectures with optimal statistical inductive biases for distribution shifts. Evaluated across diverse perturbation tasks under both semantic and distribution shifts, HarmonyCell achieves a 95% valid execution rate on heterogeneous input datasets (versus 0% for general agents) while matching or even exceeding expert-designed baselines in rigorous out-of-distribution evaluations. This dual-track orchestration enables scalable automatic virtual cell modeling without dataset-specific engineering.
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SaFeR: Safety-Critical Scenario Generation for Autonomous Driving Test via Feasibility-Constrained Token Resampling

arXiv:2603.04071v1 Announce Type: cross Abstract: Safety-critical scenario generation is crucial for evaluating autonomous driving systems. However, existing approaches often struggle to balance three conflicting objectives: adversarial criticality, physical feasibility, and behavioral realism. To bridge this gap, we propose SaFeR: safety-critical scenario generation for autonomous driving test via feasibility-constrained token resampling. We first formulate traffic generation as a discrete next token prediction problem, employing a Transformer-based model as a realism prior to capture naturalistic driving distributions. To capture complex interactions while effectively mitigating attention noise, we propose a novel differential attention mechanism within the realism prior. Building on this prior, SaFeR implements a novel resampling strategy that induces adversarial behaviors within a high-probability trust region to maintain naturalism, while enforcing a feasibility constraint derived from the Largest Feasible Region (LFR). By approximating the LFR via offline reinforcement learning, SaFeR effectively prevents the generation of theoretically inevitable collisions. Closed-loop experiments on the Waymo Open Motion Dataset and nuPlan demonstrate that SaFeR significantly outperforms state-of-the-art baselines, achieving a higher solution rate and superior kinematic realism while maintaining strong adversarial effectiveness.
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