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Received — 15 September 2026 ⏭

Tumor-derived CTHRC1 mediates ITGB3-dependent osteoclast differentiation to promote prostate cancer bone metastasis

✇Oncogene - Issue - nature.com science feeds
By: Tao Xie · Tianming Peng · Qu Li · Mingzhao Li · Maoping Cai · Qianyi Li · Yu-Zhong Yu · Jiehui Zhong · Chong Wang · Ming-Kun Chen · Zhe-Sheng Chen · Xian-Lu Song · Di Gu · Shan-Chao Zhao
11 September 2026 at 08:00

Oncogene, Published online: 11 September 2026; doi:10.1038/s41388-026-03976-6

Tumor-derived CTHRC1 mediates ITGB3-dependent osteoclast differentiation to promote prostate cancer bone metastasis
Received — 10 September 2026 ⏭

Gene Therapy for Hereditary Hematological Disorders: From Clinical Breakthroughs to Future Horizons

✇Molecular Therapy Nucleic Acids
By: Zhenghe Chen · Wei Wang · Youlan Wu · Yawen Qiang · Weisheng Cheng · Fang Liu
27 August 2026 at 08:00
Gene therapy is transforming hereditary hematological disorders. This review summarizes approved gene addition, editing, and silencing strategies for sickle cell disease, thalassemia, and hemophilia, highlights curative potential, and discusses remaining challenges such as immune responses, cost, and accessibility

Itaconate and its derivatives in human health and diseases

✇(Multiomics OR Omics) AND (Pancreatic)
By: Jianyou Gu · Wenying Zhang · Junfeng Zhang · Silue Zeng · Renpei Xia · Lei Cai · Xiaosheng Zhong · Shixiang Guo · Huaizhi Wang · Zhe-Sheng Chen
3 September 2026 at 18:00

Signal Transduct Target Ther. 2026 Sep 4;11(1):363. doi: 10.1038/s41392-026-02936-6.

ABSTRACT

Metabolic reprogramming forms the foundation of immune effector functions and the regulation of inflammation. As a pivotal node connecting the tricarboxylic acid cycle to immune signaling, the IRG1/ACOD1 and itaconate axes play a central role in coordinating inflammatory tone and redox balance. Itaconate, generated through the decarboxylation of cis aconitate, acts as an immunometabolic brake that engages multiple regulatory pathways to sustain the dynamic equilibrium between inflammation and tissue homeostasis. Across a broad spectrum of pathological conditions, including infectious diseases, metabolic disorders, ischemia‒reperfusion injury, neurodegenerative diseases, autoimmune disorders, and cancers, itaconate and its derivatives generally exert anti-inflammatory and cytoprotective effects. However, within specific microenvironments, these molecules may also be exploited by pathogens to evade immune clearance or promote immunosuppressive and protumorigenic responses. Future studies should further elucidate tissue- and lineage-specific functions, define bidirectional regulatory mechanisms, and optimize the pharmacokinetic properties of itaconate derivatives. With the advancement of multiomics integration, systems immunology, rational drug design, and engineered itaconate delivery technologies, the IRG1/ACOD1-itaconate axis and derivative-based therapeutic strategies are poised to emerge as key metabolic checkpoints and therapeutic targets in inflammatory-, metabolic-, immune-, and cancer-related diseases.

PMID:42693110 | PMC:PMC13542262 | DOI:10.1038/s41392-026-02936-6

Received — 27 May 2026 ⏭

SPACE: Unifying Symmetric and Asymmetric Routing Problems for Generalist Neural Solver

✇cs.AI, q-bio.NC updates on arXiv.org
By: Rongsheng Chen · Changliang Zhou · Canhong Yu · Yuanyao Chen · Yu Zhou · Zhuo Chen · Zhenkun Wang
26 May 2026 at 12:00
arXiv:2605.24484v1 Announce Type: new Abstract: Generalist neural routing solvers have shown great potential in solving diverse vehicle routing problems (VRPs) with a unified model. However, existing solvers are typically limited to symmetric settings or degrade in performance when switching to asymmetric settings due to input inconsistencies or inherent structural differences, substantially limiting their practicality in real-world scenarios that encompass both scenarios. To address this limitation, we define the spatial position of each node based on the relative distances to a specific set of pivots and further propose a Spatial Pivot-Aligned Coordinate-free Embedding (SPACE) framework that unifies node representation and solution generation across symmetric and asymmetric VRPs. Specifically, we construct a bidirectional Frechet representation using a novel furthest pivot sampling strategy to enable invariant node representations across distinct problem settings. Furthermore, we introduce a weight-decomposed adaptive decoding mechanism that decouples geometric perception from problem representations, mitigating the overfitting of constraint decisions to a specific geometry setting. Extensive experiments on 110 VRP variants, comprising 55 symmetric problems and their asymmetric counterparts, demonstrate that SPACE achieves promising zero-shot generalization in both symmetric and asymmetric VRPs.

Bibliometric analysis of lung cancer organoid research: trends and emerging areas of study

✇(Multiomics OR Omics) AND (Lung OR gastric OR Hepatocellular)
By: Zhe Wu · Sheng Chen · Yifan Man · Min Zhao · Rongjian Xu
25 May 2026 at 18:00

J Thorac Dis. 2026 Apr 30;18(4):406. doi: 10.21037/jtd-2026-0547. Epub 2026 Apr 27.

ABSTRACT

BACKGROUND: Lung cancer remains the leading cause of cancer-related mortality worldwide, posing a substantial global health burden. Despite advances in early detection, molecular profiling, and targeted therapies, patient outcomes remain unsatisfactory due to tumor heterogeneity, therapeutic resistance, and the lack of reliable preclinical models. In recent years, lung cancer organoids (LCOs), patient-derived three-dimensional (3D) culture systems, have demonstrated the ability to preserve the histological architecture and genomic features of primary tumors more faithfully than conventional models, making them a promising platform for translational research and precision medicine. This study aims to quantitatively evaluate the global research output, identify major contributors and collaboration patterns, and systematically uncover research hotspots and emerging trends in the field of LCOs through bibliometric analysis.

METHODS: A systematic bibliometric analysis was conducted using publications on LCOs retrieved from the Web of Science Core Collection (WoSCC). Articles published between 2015 and 2024 were included. A total of 356 publications were analyzed. Publication outputs, country and institutional contributions, collaboration networks, and keyword co-occurrence were evaluated using Bibliometrix (R package), VOSviewer, and CiteSpace.

RESULTS: The number of publications on LCOs has increased steadily over the past decade, reflecting growing research interest and technological advancement. China and the United States were identified as the leading contributors, accounting for the majority of publications, while Germany, South Korea, and Japan also demonstrated strong research capacity and active collaboration. Keyword and thematic analyses revealed several major research hotspots, including personalized medicine, drug response and resistance mechanisms, tumor microenvironment modeling, and immune-related interactions. Burst keyword analysis further identified emerging trends, such as co-culture systems, immunotherapy evaluation, and the integration of LCOs with high-throughput screening and multi-omics approaches.

CONCLUSIONS: LCOs have evolved into a versatile platform bridging basic research and clinical applications in lung cancer. This study provides a comprehensive overview of the current research landscape and highlights emerging directions in the field. Future research should focus on methodological standardization, optimization of organoid construction and evaluation, integration with multi-omics and immune models, and strengthened international collaboration to facilitate clinical translation and improve patient outcomes.

PMID:42182656 | PMC:PMC13190222 | DOI:10.21037/jtd-2026-0547

Bibliometric analysis of lung cancer organoid research: trends and emerging areas of study

✇Omics In Lung
By: Zhe Wu · Sheng Chen · Yifan Man · Min Zhao · Rongjian Xu
25 May 2026 at 18:00

J Thorac Dis. 2026 Apr 30;18(4):406. doi: 10.21037/jtd-2026-0547. Epub 2026 Apr 27.

ABSTRACT

BACKGROUND: Lung cancer remains the leading cause of cancer-related mortality worldwide, posing a substantial global health burden. Despite advances in early detection, molecular profiling, and targeted therapies, patient outcomes remain unsatisfactory due to tumor heterogeneity, therapeutic resistance, and the lack of reliable preclinical models. In recent years, lung cancer organoids (LCOs), patient-derived three-dimensional (3D) culture systems, have demonstrated the ability to preserve the histological architecture and genomic features of primary tumors more faithfully than conventional models, making them a promising platform for translational research and precision medicine. This study aims to quantitatively evaluate the global research output, identify major contributors and collaboration patterns, and systematically uncover research hotspots and emerging trends in the field of LCOs through bibliometric analysis.

METHODS: A systematic bibliometric analysis was conducted using publications on LCOs retrieved from the Web of Science Core Collection (WoSCC). Articles published between 2015 and 2024 were included. A total of 356 publications were analyzed. Publication outputs, country and institutional contributions, collaboration networks, and keyword co-occurrence were evaluated using Bibliometrix (R package), VOSviewer, and CiteSpace.

RESULTS: The number of publications on LCOs has increased steadily over the past decade, reflecting growing research interest and technological advancement. China and the United States were identified as the leading contributors, accounting for the majority of publications, while Germany, South Korea, and Japan also demonstrated strong research capacity and active collaboration. Keyword and thematic analyses revealed several major research hotspots, including personalized medicine, drug response and resistance mechanisms, tumor microenvironment modeling, and immune-related interactions. Burst keyword analysis further identified emerging trends, such as co-culture systems, immunotherapy evaluation, and the integration of LCOs with high-throughput screening and multi-omics approaches.

CONCLUSIONS: LCOs have evolved into a versatile platform bridging basic research and clinical applications in lung cancer. This study provides a comprehensive overview of the current research landscape and highlights emerging directions in the field. Future research should focus on methodological standardization, optimization of organoid construction and evaluation, integration with multi-omics and immune models, and strengthened international collaboration to facilitate clinical translation and improve patient outcomes.

PMID:42182656 | PMC:PMC13190222 | DOI:10.21037/jtd-2026-0547

Received — 17 March 2026 ⏭

Steve-Evolving: Open-World Embodied Self-Evolution via Fine-Grained Diagnosis and Dual-Track Knowledge Distillation

✇cs.AI, q-bio.NC updates on arXiv.org
By: Zhengwei Xie · Zhisheng Chen · Ziyan Weng · Tingyu Wu · Chenglong Li · Vireo Zhang · Kun Wang
16 March 2026 at 12:00
arXiv:2603.13131v1 Announce Type: new Abstract: Open-world embodied agents must solve long-horizon tasks where the main bottleneck is not single-step planning quality but how interaction experience is organized and evolved. To this end, we present Steve-Evolving, a non-parametric self-evolving framework that tightly couples fine-grained execution diagnosis with dual-track knowledge distillation in a closed loop. The method follows three phases: Experience Anchoring, Experience Distillation, and Knowledge-Driven Closed-Loop Control. In detail, Experience Anchoring solidifies each subgoal attempt into a structured experience tuple with a fixed schema (pre-state, action, diagnosis-result, and post-state) and organizes it in a three-tier experience space with multi-dimensional indices (e.g., condition signatures, spatial hashing, and semantic tags) plus rolling summarization for efficient and auditable recall. To ensure sufficient information density for attribution, the execution layer provides compositional diagnosis signals beyond binary outcomes, including state-difference summaries, enumerated failure causes, continuous indicators, and stagnation/loop detection. Moreover, successful trajectories of Experience Distillation are generalized into reusable skills with explicit preconditions and verification criteria, while failures are distilled into executable guardrails that capture root causes and forbid risky operations at both subgoal and task granularities. Besides, Knowledge-Driven Closed-Loop Control retrieved skills and guardrails are injected into an LLM planner, and diagnosis-triggered local replanning updates the active constraints online, forming a continual evolution process without any model parameter updates. Experiments on the long-horizon suite of Minecraft MCU demonstrate consistent improvements over static-retrieval baselines.
Received — 11 March 2026 ⏭

AtomicVLA: Unlocking the Potential of Atomic Skill Learning in Robots

✇cs.AI, q-bio.NC updates on arXiv.org
By: Likui Zhang · Tao Tang · Zhihao Zhan · Xiuwei Chen · Zisheng Chen · Jianhua Han · Jiangtong Zhu · Pei Xu · Hang Xu · Hefeng Wu · Liang Lin · Xiaodan Liang
10 March 2026 at 12:00
arXiv:2603.07648v1 Announce Type: cross Abstract: Recent advances in Visual-Language-Action (VLA) models have shown promising potential for robotic manipulation tasks. However, real-world robotic tasks often involve long-horizon, multi-step problem-solving and require generalization for continual skill acquisition, extending beyond single actions or skills. These challenges present significant barriers for existing VLA models, which use monolithic action decoders trained on aggregated data, resulting in poor scalability. To address these challenges, we propose AtomicVLA, a unified planning-and-execution framework that jointly generates task-level plans, atomic skill abstractions, and fine-grained actions. AtomicVLA constructs a scalable atomic skill library through a Skill-Guided Mixture-of-Experts (SG-MoE), where each expert specializes in mastering generic yet precise atomic skills. Furthermore, we introduce a flexible routing encoder that automatically assigns dedicated atomic experts to new skills, enabling continual learning. We validate our approach through extensive experiments. In simulation, AtomicVLA outperforms $\pi_{0}$ by 2.4\% on LIBERO, 10\% on LIBERO-LONG, and outperforms $\pi_{0}$ and $\pi_{0.5}$ by 0.22 and 0.25 in average task length on CALVIN. Additionally, our AtomicVLA consistently surpasses baselines by 18.3\% and 21\% in real-world long-horizon tasks and continual learning. These results highlight the effectiveness of atomic skill abstraction and dynamic expert composition for long-horizon and lifelong robotic tasks. The project page is \href{https://zhanglk9.github.io/atomicvla-web/}{here}.

Bee: A High-Quality Corpus and Full-Stack Suite to Unlock Advanced Fully Open MLLMs

✇cs.AI, q-bio.NC updates on arXiv.org
By: Yi Zhang · Bolin Ni · Xin-Sheng Chen · Heng-Rui Zhang · Yongming Rao · Houwen Peng · Qinglin Lu · Han Hu · Meng-Hao Guo · Shi-Min Hu
10 March 2026 at 12:00
arXiv:2510.13795v4 Announce Type: replace-cross Abstract: Fully open multimodal large language models (MLLMs) currently lag behind proprietary counterparts, primarily due to a significant gap in data quality for supervised fine-tuning (SFT). Existing open-source datasets are often plagued by widespread noise and a critical deficit in complex reasoning data, such as Chain-of-Thought (CoT), which hinders the development of advanced model capabilities. Addressing these challenges, our work makes three primary contributions. First, we introduce Honey-Data-15M, a new SFT dataset comprising approximately 15 million QA pairs, processed through multiple cleaning techniques and enhanced with a novel dual-level (short and long) CoT enrichment strategy. Second, we introduce HoneyPipe, the data curation pipeline, and its underlying framework DataStudio, providing the community with a transparent and adaptable methodology for data curation that moves beyond static dataset releases. Finally, to validate our dataset and pipeline, we train Bee-8B, an 8B model on Honey-Data-15M. Experiments show that Bee-8B establishes a new state-of-the-art (SOTA) for fully open MLLMs, achieving performance that is competitive with, and in some cases surpasses, recent semi-open models such as InternVL3.5-8B. Our work delivers to the community a suite of foundational resources, including: the Honey-Data-15M corpus; the full-stack suite comprising HoneyPipe and DataStudio; training recipes; an evaluation harness; and the model weights. This effort demonstrates that a principled focus on data quality is a key pathway to developing fully open MLLMs that are highly competitive with their semi-open counterparts.
Received — 5 March 2026 ⏭

When Relevance Meets Novelty: Dual-Stable Periodic Optimization for Serendipitous Recommendation

✇cs.AI, q-bio.NC updates on arXiv.org
By: Hongxiang Lin · Hao Guo · Zeshun Li · Erpeng Xue · Yongqian He · Zhaoyu Hu · Lei Wang · Sheng Chen · Long Zeng
5 March 2026 at 13:00
arXiv:2508.00450v3 Announce Type: replace-cross Abstract: Traditional recommendation systems tend to trap users in strong feedback loops by excessively pushing content aligned with their historical preferences, thereby limiting exploration opportunities and causing content fatigue. Although large language models (LLMs) demonstrate potential with their diverse content generation capabilities, existing LLM-enhanced dual-model frameworks face two major limitations: first, they overlook long-term preferences driven by group identity, leading to biased interest modeling; second, they suffer from static optimization flaws, as a one-time alignment process fails to leverage incremental user data for closed-loop optimization. To address these challenges, we propose the Co-Evolutionary Alignment (CoEA) method. For interest modeling bias, we introduce Dual-Stable Interest Exploration (DSIE) module, jointly modeling long-term group identity and short-term individual interests through parallel processing of behavioral sequences. For static optimization limitations, we design a Periodic Collaborative Optimization (PCO) mechanism. This mechanism regularly conducts preference verification on incremental data using the Relevance LLM, then guides the Novelty LLM to perform fine-tuning based on the verification results, and subsequently feeds back the output of the continually fine-tuned Novelty LLM to the Relevance LLM for re-evaluation, thereby achieving a dynamic closed-loop optimization. Extensive online and offline experiments verify the effectiveness of the CoEA model in serendipitous recommendation.

Uni-NTFM: A Unified Foundation Model for EEG Signal Representation Learning

✇cs.AI, q-bio.NC updates on arXiv.org
By: Zhisheng Chen · Yingwei Zhang · Qizhen Lan · Tianyu Liu · Huacan Wang · Yi Ding · Ziyu Jia · Ronghao Chen · Kun Wang · Xinliang Zhou
5 March 2026 at 13:00
arXiv:2509.24222v2 Announce Type: replace-cross Abstract: Current foundation models for electroencephalography (EEG) rely on architectures adapted from computer vision or natural language processing, typically treating neural signals as pixel grids or token sequences. This approach overlooks that the neural activity is activated by diverse sparse coding across a complex geometric topological cortex. Inspired by biological neural mechanisms, we propose the Unified Neural Topological Foundation Model (Uni-NTFM), an architecture rooted in three core neuroscience principles. In detail, to align with the brain's decoupled coding mechanism, we design the Heterogeneous Feature Projection Module. This module simultaneously encodes both time-domain non-stationary transients and frequency-domain steady-state rhythms, ensuring high quality in both waveform morphology and spectral rhythms. Moreover, we introduce a Topological Embedding mechanism to inject structured spatial priors and align different sensor configurations onto a unified latent functional topography, effectively reconstructing the geometry of brain regions. Furthermore, we achieve functional modularization and sparse coding efficiency of biological networks by constructing the Mixture-of-Experts Transformer network. This dynamic routing mechanism assigns different signal patterns and tasks to specialized neural subnetworks, and effectively preventing task interference while increasing the model capacity to record-breaking 1.9 billion parameters. Uni-NTFM is pre-trained on a diverse corpus comprising 28,000 hours of EEG data, and outperforms existing models across nine distinct downstream tasks under both linear probing and fine-tuning settings, demonstrating that aligning model architecture with neural mechanisms is significant to learn universal representations and achieve generalizable brain decoding. Our code is available at: https://anonymous.4open.science/r/Uni-NTFM-0924.

Intelligent Pathological Diagnosis of Gestational Trophoblastic Diseases via Visual-Language Deep Learning Model

✇cs.AI, q-bio.NC updates on arXiv.org
By: Yuhang Liu · Yueyang Cang · Wenge Que · Xinru Bai · Xingtong Wang · Kuisheng Chen · Jingya Li · Xiaoteng Zhang · Xinmin Li · Lixia Zhang · Pingge Hu · Qiaoting Xie · Peiyu Xu · Xianxu Zeng · Li Shi
4 March 2026 at 13:00
arXiv:2603.02704v1 Announce Type: cross Abstract: The pathological diagnosis of gestational trophoblastic disease(GTD) takes a long time, relies heavily on the experience of pathologists, and the consistency of initial diagnosis is low, which seriously threatens maternal health and reproductive outcomes. We developed an expert model for GTD pathological diagnosis, named GTDoctor. GTDoctor can perform pixel-based lesion segmentation on pathological slides, and output diagnostic conclusions and personalized pathological analysis results. We developed a software system, GTDiagnosis, based on this technology and conducted clinical trials. The retrospective results demonstrated that GTDiagnosis achieved a mean precision of over 0.91 for lesion detection in pathological slides (n=679 slides). In prospective studies, pathologists using GTDiagnosis attained a Positive Predictive Value of 95.59% (n=68 patients). The tool reduced average diagnostic time from 56 to 16 seconds per case (n=285 patients). GTDoctor and GTDiagnosis offer a novel solution for GTD pathological diagnosis, enhancing diagnostic performance and efficiency while maintaining clinical interpretability.
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