Normal view
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cs.AI, q-bio.NC updates on arXiv.org
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GlobalDentBench: A Multinational Benchmark for Evaluating LLM Clinical Reasoning in Dentistry with Expert Calibration
arXiv:2605.24636v2 Announce Type: new Abstract: While large language models (LLMs) hold transformative potential for medicine, their reasoning robustness and safety in real-world clinical scenarios remain critically underexplored, particularly in dentistry. Here we introduce GlobalDentBench, the first multinational dental benchmark, featuring a taxonomy that encompasses 14 dental specialties across 88 countries and regions spanning six continents. The benchmark comprises 8,978 expert-validated
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Omics in Hepatocellular
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Unlocking the Future of Hepatocellular Carcinoma Early Diagnosis: The Promise of Extracellular Vesicle Biomarkers
J Clin Transl Hepatol. 2026 Apr 28;14(4):462-477. doi: 10.14218/JCTH.2025.00589. Epub 2026 Apr 8.ABSTRACTHepatocellular carcinoma (HCC) is one of the most prevalent and aggressive malignant tumors globally, with a notably low five-year survival rate. Its high mortality is largely attributed to challenges in early detection. Extracellular vesicles (EVs) are naturally occurring nanoparticles secreted by nearly all cell types and carry a diverse array of bioactive molecules, including proteins, nuc
Unlocking the Future of Hepatocellular Carcinoma Early Diagnosis: The Promise of Extracellular Vesicle Biomarkers
J Clin Transl Hepatol. 2026 Apr 28;14(4):462-477. doi: 10.14218/JCTH.2025.00589. Epub 2026 Apr 8.
ABSTRACT
Hepatocellular carcinoma (HCC) is one of the most prevalent and aggressive malignant tumors globally, with a notably low five-year survival rate. Its high mortality is largely attributed to challenges in early detection. Extracellular vesicles (EVs) are naturally occurring nanoparticles secreted by nearly all cell types and carry a diverse array of bioactive molecules, including proteins, nucleic acids (particularly non-coding RNAs), and lipids. EVs play pivotal roles in remodeling the tumor microenvironment and driving cancer progression through intercellular communication. Accumulating evidence has established that EVs are critically involved in the pathogenesis of HCC and are emerging as promising biomarkers for its early detection. With advances in EV isolation technologies, these vesicles have garnered considerable attention in the field of liquid biopsy for HCC. This review provides a comprehensive overview of the diagnostic potential of EV-derived biomarkers in HCC, including DNA, RNA, proteins, and lipids. Additionally, it discusses the advantages of integrating multi-omics approaches for HCC diagnosis. Furthermore, the review highlights the technical challenges in EV isolation and characterization, as well as the crucial role of reference genes in the standardization of EV data. These insights underscore the potential of EVs as novel, minimally invasive liquid biopsy biomarkers for the early diagnosis of HCC.
PMID:42181837 | PMC:PMC13195390 | DOI:10.14218/JCTH.2025.00589
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Cell Death Discovery nature.com science feeds
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ATP2B4 driven chromatin compaction exacerbates pancreatic cancer radiotherapy resistance
Cell Death Discovery, Published online: 25 May 2026; doi:10.1038/s41420-026-03142-7ATP2B4 driven chromatin compaction exacerbates pancreatic cancer radiotherapy resistance
ATP2B4 driven chromatin compaction exacerbates pancreatic cancer radiotherapy resistance
Cell Death Discovery, Published online: 25 May 2026; doi:10.1038/s41420-026-03142-7
ATP2B4 driven chromatin compaction exacerbates pancreatic cancer radiotherapy resistance-
Nature - Issue - nature.com science feeds
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Advancing solar and wind penetration in China through energy complementarity
Nature, Published online: 20 May 2026; doi:10.1038/s41586-026-10570-zUsing high-resolution satellite imagery combined with a deep-learning-based framework to build a national energy inventory enables a data-driven assessment of solar–wind complementarity strategies to reduce power variability and enhance renewable energy penetration across China.
Advancing solar and wind penetration in China through energy complementarity
Nature, Published online: 20 May 2026; doi:10.1038/s41586-026-10570-z
Using high-resolution satellite imagery combined with a deep-learning-based framework to build a national energy inventory enables a data-driven assessment of solar–wind complementarity strategies to reduce power variability and enhance renewable energy penetration across China.-
Nature Cancer
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CD300ld on pathologically activated neutrophils promotes tumor immune suppression by binding phosphatidylserine on CD8<sup>+</sup> T cells
Nature Cancer, Published online: 15 May 2026; doi:10.1038/s43018-026-01169-4Zhao and colleagues show that CD300ld, upregulated in pathologically activated neutrophils, mediates contact-dependent suppression of cytotoxic CD8+ T cells by binding to phosphatidylserine, inhibiting antitumor immune responses.
CD300ld on pathologically activated neutrophils promotes tumor immune suppression by binding phosphatidylserine on CD8<sup>+</sup> T cells
Nature Cancer, Published online: 15 May 2026; doi:10.1038/s43018-026-01169-4
Zhao and colleagues show that CD300ld, upregulated in pathologically activated neutrophils, mediates contact-dependent suppression of cytotoxic CD8+ T cells by binding to phosphatidylserine, inhibiting antitumor immune responses.-
Oncogene - Issue - nature.com science feeds
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iPalmT: a new paradigm for palmitoyltransferase discovery via end-to-end deep learning
Oncogene, Published online: 18 April 2026; doi:10.1038/s41388-026-03802-ziPalmT: a new paradigm for palmitoyltransferase discovery via end-to-end deep learning
iPalmT: a new paradigm for palmitoyltransferase discovery via end-to-end deep learning
Oncogene, Published online: 18 April 2026; doi:10.1038/s41388-026-03802-z
iPalmT: a new paradigm for palmitoyltransferase discovery via end-to-end deep learning-
Nature - Issue - nature.com science feeds
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Linear RAG scanning mediates editing of Igκ variable region repertoires
Nature, Published online: 15 April 2026; doi:10.1038/s41586-026-10362-5Studies explaining the secondary Igk recombination mechanism are described and Cer/Sis deletion and/or displacement is implicated as a developmental switch converting the rearrangement mechanisms from two-loop-based diffusional primary Igk into one-loop-based linear scanning secondary mechanisms.
Linear RAG scanning mediates editing of Igκ variable region repertoires
Nature, Published online: 15 April 2026; doi:10.1038/s41586-026-10362-5
Studies explaining the secondary Igk recombination mechanism are described and Cer/Sis deletion and/or displacement is implicated as a developmental switch converting the rearrangement mechanisms from two-loop-based diffusional primary Igk into one-loop-based linear scanning secondary mechanisms.-
Omics In Lung
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Chuanminshen violaceum (Apiaceae) as a medicinal-and-edible resource: phytochemical diversity, bioactivities, and routes to standardized products
J Ethnopharmacol. 2026 Apr 6:121628. doi: 10.1016/j.jep.2026.121628. Online ahead of print.ABSTRACTETHNOPHARMACOLOGICAL RELEVANCE: Chuanminshen violaceum Sheh et Shan is a medicinal-and-edible Apiaceae plant in China recorded for yin nourishment, lung/spleen tonification, and phlegm resolution, and used for cough and chronic respiratory complaints.STUDY AIM: To synthesize current evidence on botanical resources, chemistry, pharmacology, and applications of C. violaceum, and to define priorities
Chuanminshen violaceum (Apiaceae) as a medicinal-and-edible resource: phytochemical diversity, bioactivities, and routes to standardized products
J Ethnopharmacol. 2026 Apr 6:121628. doi: 10.1016/j.jep.2026.121628. Online ahead of print.
ABSTRACT
ETHNOPHARMACOLOGICAL RELEVANCE: Chuanminshen violaceum Sheh et Shan is a medicinal-and-edible Apiaceae plant in China recorded for yin nourishment, lung/spleen tonification, and phlegm resolution, and used for cough and chronic respiratory complaints.
STUDY AIM: To synthesize current evidence on botanical resources, chemistry, pharmacology, and applications of C. violaceum, and to define priorities for standardized and safe development.
MATERIALS AND METHODS: This review integrates studies on resource distribution and ecological adaptability, multi-fraction phytochemistry, extraction-purification and formulation technologies, preclinical pharmacology, and quality, safety, and regulatory considerations.
RESULTS: C. violaceum contains structurally diverse polysaccharides plus volatile oils (often polyacetylene-rich), phenolics (e.g., chlorogenic acid and rutin), PUFA-rich lipids, and newly reported minor constituents. Polysaccharides show variable monosaccharide profiles, molecular-weight ranges, and linkage/branching patterns, strongly influenced by extraction-purification; derivatization (e.g., sulfation/selenization) and delivery systems can further tune physicochemical properties. Preclinical studies report antioxidant, anti-inflammatory, immunomodulatory, cardioprotective, and antiviral effects, commonly linked to Nrf2/Keap1 redox defense, inflammatory signaling control, TLR2/4-related immune regulation, gut-barrier reinforcement with microbiota remodeling, and anti-ferroptotic protection in myocardial ischemia-reperfusion models. Applications span traditional dosage forms and functional foods, but translation is limited by origin/process variability, incomplete long-term safety and ADME data, and regulatory uncertainty.
CONCLUSIONS: C. violaceum is a promising ethnomedicinal resource with clear part-specific features and polysaccharide-centered potential. Future work should combine multi-omics with target validation, fingerprint-guided QC and traceability, greener scalable processing, and regulatory-aligned safety packages to enable reproducible products.
PMID:41951195 | DOI:10.1016/j.jep.2026.121628
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cs.AI, q-bio.NC updates on arXiv.org
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Discrete Prototypical Memories for Federated Time Series Foundation Models
arXiv:2604.04475v1 Announce Type: cross Abstract: Leveraging Large Language Models (LLMs) as federated learning (FL)-based time series foundation models offers a promising way to transfer the generalization capabilities of LLMs to time series data while preserving access to private data. However, the semantic misalignment between time-series data and the text-centric latent space of existing LLMs often leads to degraded performance. Meanwhile, the parameter-sharing mechanism in existing FL meth
Discrete Prototypical Memories for Federated Time Series Foundation Models
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cs.AI, q-bio.NC updates on arXiv.org
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Improving Ensemble Forecasts of Abnormally Deflecting Tropical Cyclones with Fused Atmosphere-Ocean-Terrain Data
arXiv:2603.29200v2 Announce Type: replace-cross Abstract: Deep learning-based tropical cyclone (TC) forecasting methods have demonstrated significant potential and application advantages, as they feature much lower computational cost and faster operation speed than numerical weather prediction models. However, existing deep learning methods still have key limitations: they can only process a single type of sequential trajectory data or homogeneous meteorological variables, and fail to achieve a
Improving Ensemble Forecasts of Abnormally Deflecting Tropical Cyclones with Fused Atmosphere-Ocean-Terrain Data
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cs.AI, q-bio.NC updates on arXiv.org
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Improving Ensemble Forecasts of Abnormally Deflecting Tropical Cyclones with Fused Atmosphere-Ocean-Terrain Data
arXiv:2603.29200v1 Announce Type: cross Abstract: Deep learning-based tropical cyclone (TC) forecasting methods have demonstrated significant potential and application advantages, as they feature much lower computational cost and faster operation speed than numerical weather prediction models. However, existing deep learning methods still have key limitations: they can only process a single type of sequential trajectory data or homogeneous meteorological variables, and fail to achieve accurate
Improving Ensemble Forecasts of Abnormally Deflecting Tropical Cyclones with Fused Atmosphere-Ocean-Terrain Data
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Oncogene - Issue - nature.com science feeds
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LDHA-driven lactate metabolism promotes MDSC activation and immunosuppressive microenvironment in prostate cancer
Oncogene, Published online: 01 April 2026; doi:10.1038/s41388-026-03737-5LDHA-driven lactate metabolism promotes MDSC activation and immunosuppressive microenvironment in prostate cancer
LDHA-driven lactate metabolism promotes MDSC activation and immunosuppressive microenvironment in prostate cancer
Oncogene, Published online: 01 April 2026; doi:10.1038/s41388-026-03737-5
LDHA-driven lactate metabolism promotes MDSC activation and immunosuppressive microenvironment in prostate cancer-
cs.AI, q-bio.NC updates on arXiv.org
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MCLR: Improving Conditional Modeling in Visual Generative Models via Inter-Class Likelihood-Ratio Maximization and Establishing the Equivalence between Classifier-Free Guidance and Alignment Objectives
arXiv:2603.22364v1 Announce Type: cross Abstract: Diffusion models have achieved state-of-the-art performance in generative modeling, but their success often relies heavily on classifier-free guidance (CFG), an inference-time heuristic that modifies the sampling trajectory. From a theoretical perspective, diffusion models trained with standard denoising score matching (DSM) are expected to recover the target data distribution, raising the question of why inference-time guidance is necessary in
MCLR: Improving Conditional Modeling in Visual Generative Models via Inter-Class Likelihood-Ratio Maximization and Establishing the Equivalence between Classifier-Free Guidance and Alignment Objectives
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cs.AI, q-bio.NC updates on arXiv.org
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Towards Intelligent Geospatial Data Discovery: a knowledge graph-driven multi-agent framework powered by large language models
arXiv:2603.20670v2 Announce Type: replace Abstract: The rapid growth in the volume, variety, and velocity of geospatial data has created data ecosystems that are highly distributed, heterogeneous, and semantically inconsistent. Existing data catalogs, portals, and infrastructures still rely largely on keyword-based search with limited semantic support, which often fails to capture user intent and leads to weak retrieval performance. To address these challenges, this study proposes a knowledge g
Towards Intelligent Geospatial Data Discovery: a knowledge graph-driven multi-agent framework powered by large language models
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cs.AI, q-bio.NC updates on arXiv.org
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MoKus: Leveraging Cross-Modal Knowledge Transfer for Knowledge-Aware Concept Customization
arXiv:2603.12743v1 Announce Type: cross Abstract: Concept customization typically binds rare tokens to a target concept. Unfortunately, these approaches often suffer from unstable performance as the pretraining data seldom contains these rare tokens. Meanwhile, these rare tokens fail to convey the inherent knowledge of the target concept. Consequently, we introduce Knowledge-aware Concept Customization, a novel task aiming at binding diverse textual knowledge to target visual concepts. This tas
MoKus: Leveraging Cross-Modal Knowledge Transfer for Knowledge-Aware Concept Customization
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cs.AI, q-bio.NC updates on arXiv.org
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Thinking with Gaze: Sequential Eye-Tracking as Visual Reasoning Supervision for Medical VLMs
arXiv:2603.06697v1 Announce Type: cross Abstract: Vision--language models (VLMs) process images as visual tokens, yet their intermediate reasoning is often carried out in text, which can be suboptimal for visually grounded radiology tasks. Radiologists instead diagnose via sequential visual search; eye-tracking captures this process as time-ordered gaze trajectories that reveal how evidence is acquired over time. We use eye-gaze as supervision to guide VLM reasoning by introducing a small set o
Thinking with Gaze: Sequential Eye-Tracking as Visual Reasoning Supervision for Medical VLMs
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cs.AI, q-bio.NC updates on arXiv.org
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aCAPTCHA: Verifying That an Entity Is a Capable Agent via Asymmetric Hardness
arXiv:2603.07116v1 Announce Type: cross Abstract: As autonomous AI agents increasingly populate the Internet, a novel security challenge arises: "Is this entity an AI agent?" It is a new entity-type verification problem with no established solution. We formalize the problem through a three-class entity taxonomy (Human, Script, Agent) based on a verifiable agentic capability vector (action, reasoning, and memory). A timing threshold t exploits the asymmetric hardness between human cognition and
aCAPTCHA: Verifying That an Entity Is a Capable Agent via Asymmetric Hardness
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cs.AI, q-bio.NC updates on arXiv.org
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ImageEdit-R1: Boosting Multi-Agent Image Editing via Reinforcement Learning
arXiv:2603.08059v1 Announce Type: cross Abstract: With the rapid advancement of commercial multi-modal models, image editing has garnered significant attention due to its widespread applicability in daily life. Despite impressive progress, existing image editing systems, particularly closed-source or proprietary models, often struggle with complex, indirect, or multi-step user instructions. These limitations hinder their ability to perform nuanced, context-aware edits that align with human inte
ImageEdit-R1: Boosting Multi-Agent Image Editing via Reinforcement Learning
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cs.AI, q-bio.NC updates on arXiv.org
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MeanCache: From Instantaneous to Average Velocity for Accelerating Flow Matching Inference
arXiv:2601.19961v3 Announce Type: replace-cross Abstract: We present MeanCache, a training-free caching framework for efficient Flow Matching inference. Existing caching methods reduce redundant computation but typically rely on instantaneous velocity information (e.g., feature caching), which often leads to severe trajectory deviations and error accumulation under high acceleration ratios. MeanCache introduces an average-velocity perspective: by leveraging cached Jacobian--vector products (JVP
MeanCache: From Instantaneous to Average Velocity for Accelerating Flow Matching Inference
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cs.AI, q-bio.NC updates on arXiv.org
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CrystaL: Spontaneous Emergence of Visual Latents in MLLMs
arXiv:2602.20980v2 Announce Type: replace-cross Abstract: Multimodal Large Language Models (MLLMs) have achieved remarkable performance by integrating powerful language backbones with large-scale visual encoders. Among these, latent Chain-of-Thought (CoT) methods enable implicit reasoning in continuous hidden states, facilitating seamless vision-language integration and faster inference. However, existing heuristically predefined supervision signals in latent CoT provide limited guidance for pr