Oncogene, Published online: 12 September 2026; doi:10.1038/s41388-026-03988-2

Circular RNA MCM3 recruits USP49 to stabilize PTBP1 and promote cisplatin resistance in cervical squamous cell carcinoma

In the infection courses of different SARS-CoV-2 variants, disease outcomes and signatures were delineated by physiological changes, viral load, pathology, and pulmonary transcriptome analysis. This multi-dimensional landscape of disease outcomes and underlying mechanisms might provide important clues for immunotherapy of SARS-CoV-2 infection and pneumonia caused by other respiratory viruses.

arXiv:2605.06505v2 Announce Type: replace-cross Abstract: We introduce PACZero, a family of PAC-private zeroth-order mechanisms for fine-tuning large language models that delivers usable utility at $I(S^*; Y_{1:T})=0$. This privacy regime bounds the membership-inference attack (MIA) posterior success rate at the prior, an MIA-resistance level the DP framework matches only at $\varepsilon=0$ and infinite noise. All DP-ZO comparisons below are matched at the MIA posterior level. The key insight is that PAC Privacy charges mutual information only when the release depends on which candidate subset is the secret. Sign-quantizing subset-aggregated zeroth-order gradients creates frequent unanimity, steps at which every candidate subset agrees on the update direction; at these steps the released sign costs zero conditional mutual information. We propose two variants that span the privacy-utility trade-off: PACZero-MI (budgeted MI via exact calibration on the binary release) and PACZero-ZPL ($I=0$ via a uniform coin flip on disagreement steps). We evaluate on SST-2 and SQuAD with OPT-1.3B and OPT-6.7B in both LoRA and full-parameter tracks. On SST-2 OPT-1.3B full fine-tuning at $I=0$, PACZero-ZPL reaches ${88.99\pm0.91}$, within $2.1$pp of the non-private MeZO baseline ($91.1$ FT). No prior method produces usable utility in the high-privacy regime $\varepsilon

arXiv:2512.10938v2 Announce Type: replace-cross Abstract: Although normalization layers have long been viewed as indispensable components of deep learning architectures, the recent introduction of Dynamic Tanh (DyT) has demonstrated that alternatives are possible. The point-wise function DyT constrains extreme values for stable convergence and reaches normalization-level performance; this work seeks further for function designs that can surpass it. We first study how the intrinsic properties of point-wise functions influence training and performance. Building on these findings, we conduct a large-scale search for a more effective function design. Through this exploration, we introduce $\mathrm{Derf}(x) = \mathrm{erf}(\alpha x + s)$, where $\mathrm{erf}(x)$ is the rescaled Gaussian cumulative distribution function, and identify it as the most performant design. Derf outperforms LayerNorm, RMSNorm, and DyT across a wide range of domains, including visual recognition and generation, speech representation, and DNA sequence modeling. Our analysis also suggests that the performance gains of Derf largely stem from its improved generalization rather than stronger fitting capacity. Its simplicity and stronger performance make Derf a practical choice for normalization-free Transformer architectures.

arXiv:2603.22324v1 Announce Type: cross Abstract: We introduce Delta-Aware Quantization (DAQ), a data-free post-training quantization framework that preserves the knowledge acquired during post-training. Standard quantization objectives minimize reconstruction error but are agnostic to the base model, allowing quantization noise to disproportionately corrupt the small-magnitude parameter deltas ($\Delta W$) that encode post-training behavior -- an effect we analyze through the lens of quantization as implicit regularization. DAQ replaces reconstruction-based objectives with two delta-aware metrics -- Sign Preservation Rate and Cosine Similarity -- that directly optimize for directional fidelity of $\Delta W$, requiring only the base and post-trained weight matrices. In a pilot FP8 study, DAQ recovers style-specific capabilities lost under standard quantization while maintaining general performance.

arXiv:2503.04945v3 Announce Type: replace-cross Abstract: The proliferation of generative models has presented significant challenges in distinguishing authentic human-authored content from deepfake content. Collaborative human efforts, augmented by AI tools, present a promising solution. In this study, we explore the potential of DeepFakeDeLiBot, a deliberation-enhancing chatbot, to support groups in detecting deepfake text. Our findings reveal that group-based problem-solving significantly improves the accuracy of identifying machine-generated paragraphs compared to individual efforts. While engagement with DeepFakeDeLiBot does not yield substantial performance gains overall, it enhances group dynamics by fostering greater participant engagement, consensus building, and the frequency and diversity of reasoning-based utterances. Additionally, participants with higher perceived effectiveness of group collaboration exhibited performance benefits from DeepFakeDeLiBot. These findings underscore the potential of deliberative chatbots in fostering interactive and productive group dynamics while ensuring accuracy in collaborative deepfake text detection. \textit{Dataset and source code used in this study will be made publicly available upon acceptance of the manuscript.

arXiv:2603.07444v1 Announce Type: new Abstract: Large language models (LLMs) have enabled agent-based systems that aim to automate scientific research workflows. Most existing approaches focus on fully autonomous discovery, where AI systems generate research ideas, conduct analyses, and produce manuscripts with minimal human involvement. However, empirical research in economics and the social sciences poses additional constraints: research questions must be grounded in available datasets, identification strategies require careful design, and human judgment remains essential for evaluating economic significance. We introduce HLER (Human-in-the-Loop Economic Research), a multi-agent architecture that supports empirical research automation while preserving critical human oversight. The system orchestrates specialized agents for data auditing, data profiling, hypothesis generation, econometric analysis, manuscript drafting, and automated review. A key design principle is dataset-aware hypothesis generation, where candidate research questions are constrained by dataset structure, variable availability, and distributional diagnostics, reducing infeasible or hallucinated hypotheses. HLER further implements a two-loop architecture: a question quality loop that screens and selects feasible hypotheses, and a research revision loop where automated review triggers re-analysis and manuscript revision. Human decision gates are embedded at key stages, allowing researchers to guide the automated pipeline. Experiments on three empirical datasets show that dataset-aware hypothesis generation produces feasible research questions in 87% of cases (versus 41% under unconstrained generation), while complete empirical manuscripts can be produced at an average API cost of $0.8-$1.5 per run. These results suggest that Human-AI collaborative pipelines may provide a practical path toward scalable empirical research.

arXiv:2602.20094v1 Announce Type: new Abstract: As large language models (LLMs) witness increasing deployment in complex, high-stakes decision-making scenarios, it becomes imperative to ground their reasoning in causality rather than spurious correlations. However, strong performance on traditional reasoning benchmarks does not guarantee true causal reasoning ability of LLMs, as high accuracy may still arise from memorizing semantic patterns instead of analyzing the underlying true causal structures. To bridge this critical gap, we propose a new causal reasoning benchmark, CausalFlip, designed to encourage the development of new LLM paradigm or training algorithms that ground LLM reasoning in causality rather than semantic correlation. CausalFlip consists of causal judgment questions built over event triples that could form different confounder, chain, and collider relations. Based on this, for each event triple, we construct pairs of semantically similar questions that reuse the same events but yield opposite causal answers, where models that rely heavily on semantic matching are systematically driven toward incorrect predictions. To further probe models' reliance on semantic patterns, we introduce a noisy-prefix evaluation that prepends causally irrelevant text before intermediate causal reasoning steps without altering the underlying causal relations or the logic of the reasoning process. We evaluate LLMs under multiple training paradigms, including answer-only training, explicit Chain-of-Thought (CoT) supervision, and a proposed internalized causal reasoning approach that aims to mitigate explicit reliance on correlation in the reasoning process. Our results show that explicit CoT can still be misled by spurious semantic correlations, where internalizing reasoning steps yields substantially improved causal grounding, suggesting that it is promising to better elicit the latent causal reasoning capabilities of base LLMs.

arXiv:2511.01228v3 Announce Type: replace-cross Abstract: Understanding and quantifying node importance is a fundamental problem in network science and engineering, underpinning a wide range of applications such as influence maximization, social recommendation, and network dismantling. Prior research often relies on centrality measures or advanced graph embedding techniques using structural information, followed by downstream classification or regression tasks to identify critical nodes. However, these approaches typically decouple node representation learning from the ranking objective and depend heavily on the topological structure of target networks, leading to feature-task inconsistency and poor cross-network generalization. This paper proposes a novel framework that leverages causal representation learning to obtain robust and invariant node embeddings for cross-network ranking tasks. Specifically, we introduce an influence-aware causal node embedding module within an autoencoder architecture to extract node embeddings that are causally related to node importance. Furthermore, we design a unified optimization framework incorporating a causal ranking loss that jointly optimizes reconstruction and ranking objectives, thereby enabling mutual reinforcement between node representation learning and ranking optimization. This design allows the proposed model to be trained on synthetic networks and to generalize effectively across diverse real-world networks. Extensive experiments on multiple benchmark datasets demonstrate that the proposed model consistently outperforms state-of-the-art baselines in terms of both ranking accuracy and cross-network transferability, offering new insights for network analysis and engineering applications-particularly in scenarios where the target network's structure is inaccessible in advance due to privacy or security constraints.